Variant report
| Variant | rs1041712 |
|---|---|
| Chromosome Location | chr6:134169161-134169162 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:18)
| rs_ID | r2[population] |
|---|---|
| rs1001331 | 0.81[ASN][1000 genomes] |
| rs17063055 | 0.81[ASN][1000 genomes] |
| rs1746016 | 0.81[ASN][1000 genomes] |
| rs1763938 | 0.81[ASN][1000 genomes] |
| rs2327425 | 0.81[ASN][1000 genomes] |
| rs2327430 | 1.00[JPT][hapmap] |
| rs4895390 | 0.89[EUR][1000 genomes] |
| rs55896993 | 0.87[EUR][1000 genomes] |
| rs57764276 | 0.81[ASN][1000 genomes] |
| rs73774162 | 0.87[EUR][1000 genomes] |
| rs7748433 | 0.81[ASN][1000 genomes] |
| rs9483623 | 0.85[ASN][1000 genomes] |
| rs9483625 | 0.85[ASN][1000 genomes] |
| rs9493748 | 0.85[ASN][1000 genomes] |
| rs9493749 | 0.85[ASN][1000 genomes] |
| rs9493750 | 0.85[ASN][1000 genomes] |
| rs9493752 | 0.81[ASN][1000 genomes] |
| rs9493762 | 0.87[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv34122 | chr6:134089019-134378252 | Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 12 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
