Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1001331	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1041712	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs11757968	0.85[EUR][1000 genomes]
rs1208265	0.80[EUR][1000 genomes]
rs1208267	0.80[EUR][1000 genomes]
rs1208268	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208279	0.94[CEU][hapmap]
rs1208282	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1535615	0.98[EUR][1000 genomes]
rs1613895	0.87[EUR][1000 genomes]
rs17063055	0.92[ASN][1000 genomes]
rs1746015	0.95[EUR][1000 genomes]
rs1746016	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1763937	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2327425	0.92[ASN][1000 genomes]
rs2327430	1.00[JPT][hapmap]
rs4518518	0.89[EUR][1000 genomes]
rs4610586	0.89[EUR][1000 genomes]
rs57764276	0.92[ASN][1000 genomes]
rs6899948	0.87[CEU][hapmap];0.84[EUR][1000 genomes]
rs6900251	0.88[CEU][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes]
rs6915061	0.83[EUR][1000 genomes]
rs6919282	0.84[CEU][hapmap];0.84[EUR][1000 genomes]
rs6920657	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs7748433	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9321418	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9321419	0.89[EUR][1000 genomes]
rs9483623	0.96[ASN][1000 genomes]
rs9483625	0.96[ASN][1000 genomes]
rs9493748	0.96[ASN][1000 genomes]
rs9493749	0.96[ASN][1000 genomes]
rs9493750	0.96[ASN][1000 genomes]
rs9493752	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830812	chr6:133993897-134165407	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv34122	chr6:134089019-134378252	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134151200-134152600	Enhancers	Fetal Kidney	kidney
2	chr6:134152200-134154800	Weak transcription	Fetal Lung	lung
3	chr6:134152200-134155000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:134152200-134155000	Weak transcription	Ovary	ovary
5	chr6:134152400-134154800	Weak transcription	A549	lung

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