Variant report

Variant rs10421297
Chromosome Location chr19:24098980-24098981
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:24096600-24099200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
2 chr19:24097000-24099200 Active TSS Primary hematopoietic stem cells short term culture blood
3 chr19:24097000-24099200 Active TSS Fetal Brain Female brain
4 chr19:24097200-24099000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr19:24097200-24099000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr19:24097200-24099000 Active TSS HUES6 Cell Line embryonic stem cell
7 chr19:24097200-24099000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr19:24097200-24099200 Active TSS HUES64 Cell Line embryonic stem cell
9 chr19:24097200-24099200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
10 chr19:24097200-24099600 Active TSS K562 blood
11 chr19:24098200-24099000 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
12 chr19:24098200-24099000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr19:24098200-24099000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
14 chr19:24098200-24102400 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr19:24098200-24102800 Weak transcription Placenta Amnion Placenta Amnion
16 chr19:24098200-24103200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr19:24098200-24103200 Weak transcription Ovary ovary
18 chr19:24098200-24103400 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr19:24098200-24103600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr19:24098200-24105400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr19:24098200-24106800 Weak transcription Left Ventricle heart
22 chr19:24098200-24107000 Weak transcription Spleen Spleen
23 chr19:24098200-24109000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr19:24098200-24109400 Weak transcription Stomach Mucosa stomach
25 chr19:24098200-24110600 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr19:24098200-24110800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr19:24098400-24099200 Enhancers Fetal Lung lung
28 chr19:24098400-24102400 Weak transcription Primary T cells from cord blood blood
29 chr19:24098400-24102600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr19:24098400-24103200 Weak transcription Fetal Intestine Small intestine
31 chr19:24098400-24103400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr19:24098400-24104800 Weak transcription NH-A brain
33 chr19:24098400-24105000 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr19:24098400-24105600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr19:24098400-24106000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr19:24098400-24108600 Weak transcription Placenta Placenta
37 chr19:24098600-24099200 Active TSS Brain Germinal Matrix brain
38 chr19:24098600-24099400 Enhancers Fetal Muscle Trunk muscle
39 chr19:24098600-24099400 Enhancers Fetal Muscle Leg muscle
40 chr19:24098600-24099800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr19:24098600-24100200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr19:24098600-24100800 Weak transcription Fetal Kidney kidney
43 chr19:24098600-24100800 Weak transcription Pancreas Pancrea
44 chr19:24098600-24100800 Weak transcription NHLF lung
45 chr19:24098600-24101400 Transcr. at gene 5' and 3' Dnd41 blood
46 chr19:24098600-24101800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr19:24098600-24102400 Weak transcription Liver Liver
48 chr19:24098600-24102800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr19:24098600-24102800 Weak transcription Fetal Thymus thymus
50 chr19:24098600-24103000 Weak transcription Primary B cells from peripheral blood blood

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