Variant report

Variant rs10424416
Chromosome Location chr19:24109650-24109651
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:24098200-24110600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:24098200-24110800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr19:24098600-24110000 Weak transcription Gastric stomach
4 chr19:24098600-24112200 Weak transcription Muscle Satellite Cultured Cells --
5 chr19:24098600-24113600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:24098800-24115600 Weak transcription HSMM muscle
7 chr19:24099000-24112200 Weak transcription Osteobl bone
8 chr19:24100000-24113600 Weak transcription K562 blood
9 chr19:24101000-24114000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr19:24101800-24113800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:24103400-24116000 Weak transcription Placenta Amnion Placenta Amnion
12 chr19:24103600-24111800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr19:24103800-24110400 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr19:24103800-24110800 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr19:24103800-24111400 Weak transcription Fetal Muscle Leg muscle
16 chr19:24104000-24110400 Weak transcription Fetal Lung lung
17 chr19:24104000-24115600 Weak transcription Ovary ovary
18 chr19:24104800-24118000 ZNF genes & repeats Dnd41 blood
19 chr19:24105400-24111400 Weak transcription Pancreas Pancrea
20 chr19:24105400-24113600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr19:24105400-24114400 Weak transcription NHDF-Ad bronchial
22 chr19:24105600-24113800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr19:24105800-24115600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr19:24106600-24116200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
25 chr19:24106800-24111600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr19:24108000-24110000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr19:24108000-24110400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr19:24108000-24113600 Weak transcription Fetal Kidney kidney
29 chr19:24108400-24112200 Weak transcription Liver Liver
30 chr19:24108600-24110800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
31 chr19:24108800-24111600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr19:24109000-24110400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr19:24109000-24110400 ZNF genes & repeats Fetal Stomach stomach
34 chr19:24109000-24111000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr19:24109200-24110200 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr19:24109400-24110200 Weak transcription H9 Cell Line embryonic stem cell
37 chr19:24109400-24110200 Weak transcription Thymus Thymus
38 chr19:24109400-24110800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr19:24109400-24111000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:24109400-24113800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr19:24109400-24118400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr19:24109600-24110200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr19:24109600-24110200 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr19:24109600-24110200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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