The 2.0 version of rSNPBase

Variant report

Variant rs10423535
Chromosome Location chr19:19536151-19536152
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19518600-19549800 Weak transcription Fetal Brain Female brain
2 chr19:19520800-19546800 Weak transcription Hela-S3 cervix
3 chr19:19521000-19545400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:19521800-19536200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr19:19521800-19537600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:19522000-19545000 Weak transcription Fetal Lung lung
7 chr19:19522200-19548600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr19:19522200-19563400 Weak transcription Placenta Amnion Placenta Amnion
9 chr19:19522600-19537600 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr19:19525400-19538200 Enhancers Primary T cells fromperipheralblood blood
11 chr19:19528800-19539000 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr19:19528800-19544200 Weak transcription Fetal Heart heart
13 chr19:19529000-19537000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:19529000-19539000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr19:19529200-19537400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr19:19530000-19539000 Weak transcription Placenta Placenta
17 chr19:19530000-19539000 Weak transcription NHLF lung
18 chr19:19530000-19545400 Weak transcription Colonic Mucosa Colon
19 chr19:19530200-19537000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr19:19530200-19537800 Weak transcription Colon Smooth Muscle Colon
21 chr19:19530200-19543400 Weak transcription Stomach Smooth Muscle stomach
22 chr19:19530200-19547400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr19:19530400-19536800 Strong transcription Fetal Intestine Small intestine
24 chr19:19531200-19538000 Enhancers Primary T helper cells fromperipheralblood blood
25 chr19:19531400-19541600 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr19:19531400-19545000 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr19:19531600-19537400 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr19:19531800-19538000 Enhancers Liver Liver
29 chr19:19532000-19536600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr19:19532000-19538000 Weak transcription Primary hematopoietic stem cells blood
31 chr19:19532200-19536200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr19:19532200-19538000 Weak transcription Dnd41 blood
33 chr19:19532200-19539400 Weak transcription Stomach Mucosa stomach
34 chr19:19532200-19541400 Weak transcription Small Intestine intestine
35 chr19:19532400-19536600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr19:19532400-19536800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr19:19532400-19537600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr19:19532400-19537600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr19:19532400-19537600 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr19:19532400-19537600 Weak transcription NHEK skin
41 chr19:19532400-19539000 Weak transcription Duodenum Mucosa Duodenum
42 chr19:19532400-19539200 Weak transcription NHDF-Ad bronchial
43 chr19:19532400-19540000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr19:19532400-19543400 Weak transcription Primary T cells from cord blood blood
45 chr19:19532400-19544400 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr19:19532400-19545000 Weak transcription Rectal Smooth Muscle rectum
47 chr19:19532600-19536200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr19:19532600-19536400 Weak transcription Fetal Thymus thymus
49 chr19:19532600-19537600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr19:19532600-19537800 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015