Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11140084	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs12343136	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs17318424	0.96[EUR][1000 genomes]
rs17318708	0.96[EUR][1000 genomes]
rs17403376	0.96[EUR][1000 genomes]
rs17403571	0.96[EUR][1000 genomes]
rs17403697	0.96[EUR][1000 genomes]
rs17404131	0.93[EUR][1000 genomes]
rs17404249	0.86[EUR][1000 genomes]
rs55723059	0.83[EUR][1000 genomes]
rs56187856	0.83[EUR][1000 genomes]
rs7018958	0.96[EUR][1000 genomes]
rs7023423	0.96[EUR][1000 genomes]
rs7029023	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs7029634	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs7034364	1.00[CEU][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs72745040	0.96[EUR][1000 genomes]
rs72745041	0.96[EUR][1000 genomes]
rs72745045	0.96[EUR][1000 genomes]
rs72745054	0.93[EUR][1000 genomes]
rs72745061	0.93[EUR][1000 genomes]
rs72745068	0.86[EUR][1000 genomes]
rs72745072	0.86[EUR][1000 genomes]
rs72745086	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046491	chr9:85861492-86063992	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv893512	chr9:86022215-86323309	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86013400-86041000	Weak transcription	Aorta	Aorta
2	chr9:86016600-86023600	Weak transcription	HepG2	liver
3	chr9:86017400-86034400	Weak transcription	Psoas Muscle	Psoas
4	chr9:86019400-86037600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr9:86020800-86024200	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr9:86021200-86041600	Weak transcription	Right Ventricle	heart
7	chr9:86021800-86023000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
8	chr9:86022600-86023000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
9	chr9:86022600-86023000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
10	chr9:86022800-86023200	ZNF genes & repeats	Fetal Muscle Leg	muscle

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