The 2.0 version of rSNPBase

Variant report

Variant rs10489708
Chromosome Location chr1:185643193-185643194
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185632800-185643400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:185632800-185646200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:185635400-185648200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:185637200-185649200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:185637400-185643400 Weak transcription Duodenum Mucosa Duodenum
6 chr1:185639600-185643200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:185639600-185643200 Weak transcription Aorta Aorta
8 chr1:185639600-185643200 Weak transcription A549 lung
9 chr1:185639600-185643400 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr1:185639600-185643400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:185639600-185643800 Weak transcription Adipose Nuclei Adipose
12 chr1:185639600-185648600 Weak transcription Left Ventricle heart
13 chr1:185639600-185649200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:185639800-185643200 Weak transcription Fetal Heart heart
15 chr1:185640000-185643200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr1:185640000-185643400 Weak transcription Primary hematopoietic stem cells blood
17 chr1:185640000-185648600 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr1:185641800-185644000 Enhancers Stomach Mucosa stomach
19 chr1:185641800-185644200 Enhancers Primary monocytes fromperipheralblood blood
20 chr1:185641800-185644400 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr1:185642000-185643200 Enhancers HUVEC blood vessel
22 chr1:185642000-185643400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:185642000-185643600 Enhancers Pancreas Pancrea
24 chr1:185642000-185645000 Enhancers Primary B cells from peripheral blood blood
25 chr1:185642000-185645200 Enhancers Rectal Mucosa Donor 31 rectum
26 chr1:185642200-185643200 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr1:185642200-185643200 Weak transcription Fetal Lung lung
28 chr1:185642200-185643800 Weak transcription Brain Hippocampus Middle brain
29 chr1:185642200-185644000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:185642200-185644400 Enhancers Primary neutrophils fromperipheralblood blood
31 chr1:185642400-185643200 Enhancers Primary B cells from cord blood blood
32 chr1:185642400-185643200 Enhancers Rectal Mucosa Donor 29 rectum
33 chr1:185642600-185643200 Enhancers HepG2 liver
34 chr1:185642600-185648400 Weak transcription Right Atrium heart
35 chr1:185642800-185643200 Enhancers Primary T cells from cord blood blood
36 chr1:185642800-185643200 Enhancers Primary T cells fromperipheralblood blood
37 chr1:185642800-185643200 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr1:185642800-185643200 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr1:185642800-185643200 Enhancers Fetal Thymus thymus
40 chr1:185643000-185643200 Enhancers Fetal Intestine Small intestine
41 chr1:185643000-185643200 Weak transcription Fetal Muscle Leg muscle
42 chr1:185643000-185643400 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr1:185643000-185644000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr1:185643000-185644000 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr1:185643000-185644000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
46 chr1:185643000-185644200 Enhancers Primary T helper naive cells from peripheral blood blood
47 chr1:185643000-185644200 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr1:185643000-185644400 Enhancers Primary T helper cells fromperipheralblood blood
49 chr1:185643000-185644600 Enhancers Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015