Variant report
| Variant | rs10504304 |
|---|---|
| Chromosome Location | chr8:60909708-60909709 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr8:60909031..60911601-chr8:61562751..61565399,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10091969 | 0.90[EUR][1000 genomes] |
| rs10092264 | 0.91[EUR][1000 genomes] |
| rs10104844 | 1.00[EUR][1000 genomes] |
| rs10105249 | 0.91[EUR][1000 genomes] |
| rs10113409 | 0.91[EUR][1000 genomes] |
| rs11986881 | 1.00[EUR][1000 genomes] |
| rs11990259 | 0.91[EUR][1000 genomes] |
| rs11997353 | 0.91[EUR][1000 genomes] |
| rs13439744 | 0.91[EUR][1000 genomes] |
| rs16925552 | 1.00[EUR][1000 genomes] |
| rs16925559 | 0.91[EUR][1000 genomes] |
| rs17279957 | 1.00[EUR][1000 genomes] |
| rs17280265 | 0.91[EUR][1000 genomes] |
| rs17280286 | 1.00[EUR][1000 genomes] |
| rs17280386 | 1.00[EUR][1000 genomes] |
| rs17280559 | 0.91[EUR][1000 genomes] |
| rs17280832 | 1.00[EUR][1000 genomes] |
| rs17281256 | 0.91[EUR][1000 genomes] |
| rs17281312 | 1.00[EUR][1000 genomes] |
| rs17281361 | 1.00[EUR][1000 genomes] |
| rs17344931 | 0.90[EUR][1000 genomes] |
| rs17346051 | 0.91[EUR][1000 genomes] |
| rs17346175 | 1.00[EUR][1000 genomes] |
| rs17346319 | 1.00[EUR][1000 genomes] |
| rs17346443 | 0.91[EUR][1000 genomes] |
| rs17346637 | 1.00[EUR][1000 genomes] |
| rs28429790 | 0.91[EUR][1000 genomes] |
| rs28483493 | 0.91[EUR][1000 genomes] |
| rs28654982 | 0.91[EUR][1000 genomes] |
| rs28663360 | 0.91[EUR][1000 genomes] |
| rs62509861 | 1.00[EUR][1000 genomes] |
| rs62509862 | 0.91[EUR][1000 genomes] |
| rs62511150 | 0.90[EUR][1000 genomes] |
| rs62512088 | 1.00[EUR][1000 genomes] |
| rs62512128 | 0.91[EUR][1000 genomes] |
| rs62512129 | 0.91[EUR][1000 genomes] |
| rs62512130 | 0.91[EUR][1000 genomes] |
| rs62512131 | 0.91[EUR][1000 genomes] |
| rs62512132 | 0.91[EUR][1000 genomes] |
| rs73682244 | 0.91[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv831331 | chr8:60770382-60959633 | Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:60909600-60910400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
