Variant report

Variant	rs10504392
Chromosome Location	chr8:66685573-66685574
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1316700	1.00[CEU][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2063685	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs57463822	0.85[EUR][1000 genomes]
rs59198392	0.95[ASN][1000 genomes]
rs6472221	0.88[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6472222	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs6472224	0.86[ASN][1000 genomes]
rs6472228	1.00[JPT][hapmap]
rs66537647	0.82[ASN][1000 genomes]
rs66609388	0.95[ASN][1000 genomes]
rs67813477	0.86[ASN][1000 genomes]
rs6984402	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs7014676	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs72666552	0.86[ASN][1000 genomes]
rs7839014	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66645600-66686000	Weak transcription	HSMM	muscle
2	chr8:66647800-66695200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr8:66649000-66690200	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr8:66651600-66690200	Weak transcription	NH-A	brain
5	chr8:66654600-66690200	Weak transcription	Lung	lung
6	chr8:66656400-66687800	Weak transcription	Pancreas	Pancrea
7	chr8:66658600-66686000	Weak transcription	Fetal Muscle Trunk	muscle
8	chr8:66658600-66687800	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr8:66659800-66687400	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr8:66662800-66690200	Weak transcription	HepG2	liver
11	chr8:66665400-66687800	Strong transcription	Fetal Thymus	thymus
12	chr8:66667400-66687800	Strong transcription	Dnd41	blood
13	chr8:66668200-66686200	Weak transcription	Liver	Liver
14	chr8:66668600-66685600	Weak transcription	Adipose Nuclei	Adipose
15	chr8:66669400-66687800	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr8:66670800-66687400	Weak transcription	Brain Germinal Matrix	brain
17	chr8:66671400-66687200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr8:66671400-66687800	Weak transcription	Duodenum Mucosa	Duodenum
19	chr8:66671400-66690200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr8:66671800-66687000	Weak transcription	Fetal Brain Female	brain
21	chr8:66671800-66687800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr8:66671800-66689800	Weak transcription	K562	blood
23	chr8:66671800-66690200	Weak transcription	Gastric	stomach
24	chr8:66672000-66686200	Weak transcription	Cortex derived primary cultured neurospheres	brain
25	chr8:66674000-66687000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr8:66674200-66687000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr8:66674200-66687800	Weak transcription	Aorta	Aorta
28	chr8:66674200-66695000	Weak transcription	Brain Angular Gyrus	brain
29	chr8:66674600-66687000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr8:66674600-66687200	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr8:66674600-66690000	Weak transcription	Rectal Smooth Muscle	rectum
32	chr8:66674800-66687000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr8:66674800-66687800	Weak transcription	Brain Hippocampus Middle	brain
34	chr8:66674800-66687800	Weak transcription	HSMMtube	muscle
35	chr8:66675800-66687000	Strong transcription	Primary T cells fromperipheralblood	blood
36	chr8:66676000-66687600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
37	chr8:66676400-66687800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
38	chr8:66677000-66687000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr8:66677200-66687000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
40	chr8:66677200-66687400	Weak transcription	Fetal Heart	heart
41	chr8:66677400-66686200	Weak transcription	Fetal Lung	lung
42	chr8:66677400-66690400	Weak transcription	Right Ventricle	heart
43	chr8:66677800-66687000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr8:66677800-66687600	Strong transcription	Primary B cells from peripheral blood	blood
45	chr8:66678000-66690200	Weak transcription	Small Intestine	intestine
46	chr8:66678400-66686000	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr8:66678600-66686400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr8:66678600-66687600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
49	chr8:66678600-66701400	Weak transcription	Ovary	ovary
50	chr8:66679000-66685800	Strong transcription	Primary T cells from cord blood	blood

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