Variant report

Variant	rs7014676
Chromosome Location	chr8:66696711-66696712
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:66695741..66698678-chr8:66932629..66934768,2	MCF-7	breast:
2	chr8:66694766..66697398-chr8:66700034..66702367,3	K562	blood:
3	chr8:66695473..66703733-chr8:66751774..66756006,10	K562	blood:
4	chr8:66689911..66693837-chr8:66694545..66697182,4	K562	blood:
5	chr8:66689911..66692422-chr8:66694322..66696808,3	K562	blood:
6	chr8:66695473..66698049-chr8:66752763..66755966,4	K562	blood:

Variant related genes	Relation type
ENSG00000147570	Chromatin interaction
ENSG00000205268	Chromatin interaction
ENSG00000272192	Chromatin interaction

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10504392	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs11782766	0.89[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs1316700	0.92[CEU][hapmap];0.88[EUR][1000 genomes]
rs1513723	0.83[JPT][hapmap]
rs16932346	0.90[JPT][hapmap]
rs1877640	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2063685	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28501341	0.94[YRI][hapmap]
rs56139500	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57463822	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6415604	0.90[JPT][hapmap]
rs6472221	0.81[CEU][hapmap]
rs6472222	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6472225	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.86[ASN][1000 genomes]
rs6472226	1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[YRI][hapmap];0.84[ASN][1000 genomes]
rs6472227	0.81[JPT][hapmap]
rs67441920	0.84[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7000292	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7828699	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7829484	0.81[JPT][hapmap]
rs972362	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs974149	0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66678600-66701400	Weak transcription	Ovary	ovary
2	chr8:66688200-66706200	Weak transcription	Brain Anterior Caudate	brain
3	chr8:66689200-66707200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr8:66690600-66702400	Weak transcription	Esophagus	oesophagus
5	chr8:66690800-66697600	Weak transcription	Small Intestine	intestine
6	chr8:66691000-66702200	Weak transcription	Spleen	Spleen
7	chr8:66691000-66702400	Weak transcription	Colonic Mucosa	Colon
8	chr8:66691200-66699000	Weak transcription	Fetal Intestine Small	intestine
9	chr8:66691200-66702000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr8:66691600-66699400	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr8:66691600-66699400	Weak transcription	Fetal Kidney	kidney
12	chr8:66692200-66697000	Strong transcription	Dnd41	blood
13	chr8:66692200-66699000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr8:66693000-66708600	Weak transcription	NHDF-Ad	bronchial
15	chr8:66693600-66699000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr8:66693600-66699000	Weak transcription	Rectal Mucosa Donor 31	rectum
17	chr8:66693600-66701200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr8:66693600-66701200	Weak transcription	Gastric	stomach
19	chr8:66693600-66702200	Weak transcription	Pancreas	Pancrea
20	chr8:66693600-66703800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr8:66693600-66704800	Weak transcription	Rectal Smooth Muscle	rectum
22	chr8:66693600-66707400	Weak transcription	Placenta	Placenta
23	chr8:66693800-66697800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr8:66693800-66698400	Weak transcription	HSMM	muscle
25	chr8:66693800-66698800	Weak transcription	Fetal Muscle Leg	muscle
26	chr8:66693800-66699000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr8:66693800-66699000	Weak transcription	Liver	Liver
28	chr8:66693800-66699000	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr8:66693800-66699000	Weak transcription	Hela-S3	cervix
30	chr8:66693800-66701000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr8:66693800-66701200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr8:66693800-66701200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr8:66693800-66701200	Weak transcription	Fetal Stomach	stomach
34	chr8:66693800-66701400	Weak transcription	Brain Cingulate Gyrus	brain
35	chr8:66693800-66701400	Weak transcription	Brain Hippocampus Middle	brain
36	chr8:66693800-66704800	Weak transcription	HSMMtube	muscle
37	chr8:66693800-66707400	Weak transcription	Aorta	Aorta
38	chr8:66694000-66698800	Weak transcription	K562	blood
39	chr8:66694000-66699000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr8:66694000-66699000	Weak transcription	Duodenum Mucosa	Duodenum
41	chr8:66694000-66701000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
42	chr8:66694000-66701000	Weak transcription	Colon Smooth Muscle	Colon
43	chr8:66694000-66701200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
44	chr8:66694200-66697600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
45	chr8:66694200-66698800	Weak transcription	HMEC	breast
46	chr8:66694200-66699000	Weak transcription	Primary hematopoietic stem cells	blood
47	chr8:66694200-66699000	Weak transcription	Fetal Intestine Large	intestine
48	chr8:66694200-66699600	Weak transcription	Fetal Lung	lung
49	chr8:66694200-66701000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr8:66694200-66701200	Weak transcription	H9 Cell Line	embryonic stem cell

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