Variant report

Variant	rs10505751
Chromosome Location	chr12:10209711-10209712
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11053569	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12582351	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17205644	0.94[CEU][hapmap];0.85[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4764227	0.92[ASN][1000 genomes]
rs61918591	0.91[EUR][1000 genomes]
rs61918592	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61918593	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61918595	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7136826	0.95[CHB][hapmap];0.93[CHD][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.86[ASN][1000 genomes]
rs874463	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524870	chr12:10209711-10219885	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10206200-10211000	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr12:10207800-10211800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr12:10208000-10213800	Weak transcription	Primary hematopoietic stem cells	blood
4	chr12:10209200-10211000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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