Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10002281	0.84[ASW][hapmap];0.90[LWK][hapmap]
rs10011608	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs10025590	0.81[YRI][hapmap]
rs10031952	1.00[MEX][hapmap]
rs10517178	0.87[CHD][hapmap]
rs11730134	0.88[AFR][1000 genomes]
rs12640095	0.87[LWK][hapmap];0.87[MKK][hapmap];0.92[YRI][hapmap]
rs12645665	0.87[LWK][hapmap];0.87[MKK][hapmap];0.91[YRI][hapmap]
rs1372491	0.87[CHD][hapmap]
rs1372498	0.84[ASW][hapmap]
rs17600029	0.84[ASW][hapmap];0.87[LWK][hapmap]
rs2351299	0.87[LWK][hapmap];0.92[YRI][hapmap]
rs2351300	0.84[ASW][hapmap];0.87[LWK][hapmap]
rs28595484	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3775536	0.96[YRI][hapmap];0.87[AFR][1000 genomes]
rs3822110	0.84[ASW][hapmap]
rs6447541	0.84[ASW][hapmap]
rs6852985	0.87[CHD][hapmap]
rs6854637	0.81[LWK][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes]
rs7435958	0.84[ASW][hapmap];0.90[LWK][hapmap]
rs7663591	0.81[LWK][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes]
rs9291303	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv537078	chr4:47059778-47137372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv829922	chr4:47093785-47261181	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv879003	chr4:47102993-47215939	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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