Variant report

Variant	rs9291303
Chromosome Location	chr4:47108657-47108658
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10011608	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10025590	0.86[YRI][hapmap]
rs10517179	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs11730134	0.84[AFR][1000 genomes]
rs12640095	0.88[YRI][hapmap]
rs12645665	0.87[YRI][hapmap]
rs1946966	0.81[YRI][hapmap]
rs2351299	0.88[YRI][hapmap]
rs28595484	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3775536	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs6854637	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7663591	1.00[YRI][hapmap];0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv537078	chr4:47059778-47137372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv829922	chr4:47093785-47261181	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv879003	chr4:47102993-47215939	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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