The 2.0 version of rSNPBase

Variant report

Variant rs10736100
Chromosome Location chr10:98029561-98029562
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:98021000-98029800 Transcr. at gene 5' and 3' GM12878-XiMat blood
2 chr10:98023600-98031800 Weak transcription Small Intestine intestine
3 chr10:98023800-98032000 Weak transcription Spleen Spleen
4 chr10:98026200-98033000 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr10:98027400-98030800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr10:98027400-98031200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr10:98027600-98030800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr10:98027600-98030800 Weak transcription NHEK skin
9 chr10:98028200-98030200 Flanking Active TSS Duodenum Mucosa Duodenum
10 chr10:98028200-98030200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
11 chr10:98028200-98031000 Active TSS Duodenum Smooth Muscle Duodenum
12 chr10:98028200-98031000 Active TSS Rectal Smooth Muscle rectum
13 chr10:98028200-98032000 Active TSS Primary Natural Killer cells fromperipheralblood blood
14 chr10:98028200-98032200 Active TSS Brain Hippocampus Middle brain
15 chr10:98028400-98031600 Active TSS Rectal Mucosa Donor 29 rectum
16 chr10:98028800-98031600 Active TSS Fetal Kidney kidney
17 chr10:98029000-98029800 Active TSS Primary hematopoietic stem cells blood
18 chr10:98029200-98029600 Flanking Active TSS Gastric stomach
19 chr10:98029200-98029600 Enhancers Lung lung
20 chr10:98029200-98029600 Flanking Active TSS Pancreas Pancrea
21 chr10:98029200-98029800 Flanking Active TSS Fetal Intestine Small intestine
22 chr10:98029200-98030200 Enhancers Placenta Placenta
23 chr10:98029200-98030600 Enhancers Primary monocytes fromperipheralblood blood
24 chr10:98029200-98030800 Active TSS Adipose Nuclei Adipose
25 chr10:98029200-98031000 Active TSS Colonic Mucosa Colon
26 chr10:98029200-98031000 Enhancers Fetal Lung lung
27 chr10:98029200-98031200 Active TSS Primary mononuclear cells fromperipheralblood Blood
28 chr10:98029200-98031400 Active TSS Fetal Stomach stomach
29 chr10:98029200-98031600 Active TSS Fetal Intestine Large intestine
30 chr10:98029400-98029600 Flanking Active TSS Primary B cells from cord blood blood
31 chr10:98029400-98029600 Enhancers Aorta Aorta
32 chr10:98029400-98029600 Flanking Active TSS Sigmoid Colon Sigmoid Colon
33 chr10:98029400-98029600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
34 chr10:98029400-98029600 Flanking Active TSS Stomach Mucosa stomach
35 chr10:98029400-98029800 Active TSS Esophagus oesophagus
36 chr10:98029400-98030000 Active TSS Brain Angular Gyrus brain
37 chr10:98029400-98030000 Active TSS Brain Cingulate Gyrus brain
38 chr10:98029400-98030000 Enhancers Placenta Amnion Placenta Amnion
39 chr10:98029400-98030400 Enhancers HMEC breast
40 chr10:98029400-98031400 Active TSS Primary B cells from peripheral blood blood
41 chr10:98029400-98031400 Active TSS Liver Liver

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Last update: Aug 31, 2015