Variant report

Variant	rs1902703
Chromosome Location	chr10:98027336-98027337
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98018546..98020304-chr10:98024707..98027759,3	MCF-7	breast:

rs_ID	r²[population]
rs10736100	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10736105	1.00[AMR][1000 genomes]
rs10786275	1.00[AMR][1000 genomes]
rs1923690	1.00[AMR][1000 genomes]
rs2861309	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2861310	0.88[AFR][1000 genomes]
rs4614371	1.00[AMR][1000 genomes]
rs4918999	1.00[AMR][1000 genomes]
rs6584066	1.00[AMR][1000 genomes]
rs7081385	1.00[AMR][1000 genomes]
rs7895009	1.00[AMR][1000 genomes]
rs941992	1.00[AMR][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97996400-98029200	Weak transcription	Fetal Stomach	stomach
2	chr10:98019800-98028200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr10:98020000-98029400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr10:98021000-98029800	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
5	chr10:98023600-98031800	Weak transcription	Small Intestine	intestine
6	chr10:98023800-98032000	Weak transcription	Spleen	Spleen
7	chr10:98024600-98029200	Weak transcription	Placenta	Placenta
8	chr10:98025400-98029400	Enhancers	Stomach Mucosa	stomach
9	chr10:98025600-98027600	Enhancers	Pancreas	Pancrea
10	chr10:98025800-98028600	Weak transcription	Fetal Kidney	kidney
11	chr10:98026000-98027400	Enhancers	Gastric	stomach
12	chr10:98026000-98027400	Enhancers	Sigmoid Colon	Sigmoid Colon
13	chr10:98026000-98027600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr10:98026000-98027800	Enhancers	HMEC	breast
15	chr10:98026200-98027600	Transcr. at gene 5' and 3'	Primary B cells from cord blood	blood
16	chr10:98026200-98027600	Flanking Active TSS	Duodenum Mucosa	Duodenum
17	chr10:98026200-98029000	Flanking Active TSS	Liver	Liver
18	chr10:98026200-98033000	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr10:98026400-98028200	Enhancers	Rectal Mucosa Donor 31	rectum
20	chr10:98026400-98028200	Weak transcription	Rectal Smooth Muscle	rectum
21	chr10:98026600-98027400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr10:98026600-98027400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr10:98026600-98027400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
24	chr10:98026600-98027600	Enhancers	NHEK	skin
25	chr10:98026600-98027800	Enhancers	Placenta Amnion	Placenta Amnion
26	chr10:98026800-98028000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr10:98026800-98028200	Weak transcription	Esophagus	oesophagus
28	chr10:98026800-98029000	Enhancers	Fetal Intestine Large	intestine
29	chr10:98026800-98029200	Enhancers	Fetal Intestine Small	intestine
30	chr10:98027000-98027400	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr10:98027000-98027400	Active TSS	Brain Hippocampus Middle	brain
32	chr10:98027000-98029200	Transcr. at gene 5' and 3'	Primary B cells from peripheral blood	blood
33	chr10:98027200-98028200	Weak transcription	Colonic Mucosa	Colon

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