The 2.0 version of rSNPBase

Variant report

Variant rs10770029
Chromosome Location chr11:9420797-9420798
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9407200-9425400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr11:9407200-9427000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:9407200-9430400 Weak transcription Spleen Spleen
4 chr11:9407200-9430600 Weak transcription Esophagus oesophagus
5 chr11:9407200-9430600 Weak transcription Pancreas Pancrea
6 chr11:9407200-9430800 Weak transcription Gastric stomach
7 chr11:9407400-9427000 Weak transcription Fetal Muscle Trunk muscle
8 chr11:9407400-9427000 Weak transcription Left Ventricle heart
9 chr11:9407600-9431400 Weak transcription HSMMtube muscle
10 chr11:9407600-9442000 Weak transcription Fetal Brain Male brain
11 chr11:9407600-9464000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr11:9407800-9425400 Weak transcription Fetal Muscle Leg muscle
13 chr11:9407800-9427000 Weak transcription H9 Cell Line embryonic stem cell
14 chr11:9408000-9424800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:9408200-9431000 Weak transcription Brain Cingulate Gyrus brain
16 chr11:9408400-9428400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr11:9408800-9426400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr11:9408800-9427000 Weak transcription Fetal Brain Female brain
19 chr11:9408800-9431200 Weak transcription Brain Substantia Nigra brain
20 chr11:9409000-9421000 Weak transcription NHLF lung
21 chr11:9409000-9422800 Weak transcription HUVEC blood vessel
22 chr11:9409000-9424800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr11:9409000-9424800 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr11:9409000-9427000 Weak transcription Liver Liver
25 chr11:9409000-9427200 Weak transcription HMEC breast
26 chr11:9409200-9425600 Weak transcription Primary monocytes fromperipheralblood blood
27 chr11:9409200-9427000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr11:9409200-9427200 Weak transcription Psoas Muscle Psoas
29 chr11:9410400-9425600 Weak transcription Lung lung
30 chr11:9411200-9421200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr11:9411200-9424800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:9414000-9425800 Weak transcription Fetal Intestine Large intestine
33 chr11:9414400-9424800 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr11:9414400-9425800 Weak transcription Duodenum Mucosa Duodenum
35 chr11:9414800-9421200 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr11:9414800-9425800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr11:9414800-9426200 Weak transcription Thymus Thymus
38 chr11:9415000-9421000 Weak transcription HepG2 liver
39 chr11:9415400-9426000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr11:9415800-9422600 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr11:9415800-9430000 Weak transcription Primary hematopoietic stem cells blood
42 chr11:9416000-9423000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr11:9416000-9456000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr11:9416200-9424800 Weak transcription Fetal Thymus thymus
45 chr11:9416400-9421000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr11:9417200-9421200 Weak transcription HSMM muscle
47 chr11:9418000-9421600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr11:9418000-9424000 Weak transcription Fetal Stomach stomach
49 chr11:9418000-9425400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr11:9418000-9430400 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015