Variant report

Variant	rs10775540
Chromosome Location	chr19:43523906-43523907
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr19:43523840-43523990	HFF-Myc	foreskin:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
2	CTCF	chr19:43523800-43523950	AG09309	skin:	n/a	n/a
3	CTCF	chr19:43523820-43523970	AG09309	skin:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
4	CTCF	chr19:43523820-43523970	GM12869	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
5	CTCF	chr19:43523719-43524021	HepG2	liver:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
6	CTCF	chr19:43523780-43523930	GM12864	blood:	n/a	n/a
7	RAD21	chr19:43523889-43524117	Hela-S3	cervix:	n/a	n/a
8	CTCF	chr19:43523682-43524077	NHEK	skin:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
9	CTCF	chr19:43523903-43524002	GM19240	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
10	CTCF	chr19:43523820-43523970	HA-sp	spinal cord:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
11	IRF4	chr19:43523511-43523994	GM12878	blood:	n/a	n/a
12	CTCF	chr19:43523820-43523970	NHEK	skin:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
13	CTCF	chr19:43523820-43523970	AG04449	skin:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
14	CTCF	chr19:43523702-43524026	MCF-7	breast:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
15	CTCF	chr19:43523840-43523990	NHLF	lung:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
16	CTCF	chr19:43523615-43524074	A549	lung:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
17	CTCF	chr19:43523761-43524191	A549	lung:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
18	CTCF	chr19:43523820-43523970	GM12872	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
19	CTCF	chr19:43523904-43523982	GM12892	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
20	MYC	chr19:43523868-43524107	A549	lung:	n/a	chr19:43523963-43523979
21	CTCF	chr19:43523840-43523990	GM12864	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
22	CTCF	chr19:43523780-43523930	HEK293	kidney:	n/a	n/a
23	CTCF	chr19:43523705-43524072	MCF-7	breast:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
24	IRF4	chr19:43523507-43524005	GM12878	blood:	n/a	n/a
25	CTCF	chr19:43523769-43524095	K562	blood:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
26	CTCF	chr19:43523840-43523990	HMEC	breast:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
27	CTCF	chr19:43523876-43524019	Fibrobl	skin:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
28	CTCF	chr19:43523800-43523950	HRPEpiC	eye:	n/a	n/a
29	CTCF	chr19:43523800-43523950	Hela-S3	cervix:	n/a	n/a
30	CTCF	chr19:43523676-43524018	MCF-7	breast:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
31	CTCF	chr19:43523820-43523970	HRE	kidney:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
32	CTCF	chr19:43523820-43523970	HEK293	kidney:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
33	CTCF	chr19:43523800-43523950	AG04449	skin:	n/a	n/a
34	RAD21	chr19:43523833-43524027	MCF-7	breast:	n/a	n/a
35	CTCF	chr19:43523840-43523990	HAc	cerebellar:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
36	RAD21	chr19:43523840-43524065	SK-N-SH_RA	brain:	n/a	n/a
37	CTCF	chr19:43523800-43523950	AoAF	blood vessel:	n/a	n/a
38	CTCF	chr19:43523820-43523970	AG04450	lung:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
39	CTCF	chr19:43523649-43524084	K562	blood:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
40	CTCF	chr19:43523840-43523990	HCT-116	colon:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
41	CTCF	chr19:43523820-43523970	GM12873	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
42	CTCF	chr19:43523840-43523990	HRPEpiC	eye:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
43	CTCF	chr19:43523840-43523990	GM12865	blood:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
44	CTCF	chr19:43523820-43523970	Hela-S3	cervix:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
45	CTCF	chr19:43523606-43523959	K562	blood:	n/a	chr19:43523776-43523789 chr19:43523775-43523796
46	CTCF	chr19:43523820-43523970	HBMEC	blood vessel:	n/a	chr19:43523952-43523965 chr19:43523949-43523967
47	CTCF	chr19:43523551-43524121	A549	lung:	n/a	chr19:43523952-43523965 chr19:43523776-43523789 chr19:43523949-43523967 chr19:43523775-43523796 chr19:43523951-43523972
48	CTCF	chr19:43523800-43523950	GM12865	blood:	n/a	n/a
49	CTCF	chr19:43523840-43523990	A549	lung:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972
50	CTCF	chr19:43523840-43523990	HFF	foreskin:	n/a	chr19:43523952-43523965 chr19:43523949-43523967 chr19:43523951-43523972

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:43523469..43524084-chr19:43531918..43532440,2	MCF-7	breast:

Variant related genes	Relation type
PSG11	TF binding region

Extended variants
information (count: 716 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:92)

rs_ID	r²[population]
rs10412444	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10775538	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10853761	0.95[EUR][1000 genomes]
rs10853762	0.97[EUR][1000 genomes]
rs11083672	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11083675	0.95[EUR][1000 genomes]
rs11083676	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11083677	0.98[EUR][1000 genomes]
rs11083678	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11083679	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11083680	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11083681	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11083683	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11666257	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11667150	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11668675	0.94[EUR][1000 genomes]
rs11668739	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11668790	0.95[EUR][1000 genomes]
rs11669224	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11670025	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11670071	0.94[EUR][1000 genomes]
rs11671245	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11673614	0.94[EUR][1000 genomes]
rs11881408	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11882741	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11882793	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12150865	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12610565	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12610793	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12976403	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12976843	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12976854	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12977541	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1860455	0.94[EUR][1000 genomes]
rs1962504	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1962505	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1963786	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1989369	0.90[EUR][1000 genomes]
rs1989370	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1989371	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2354821	0.84[AFR][1000 genomes]
rs2354823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2526706	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2526711	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2526712	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2526714	0.83[EUR][1000 genomes]
rs2526715	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2526716	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2736151	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2883539	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs34291546	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3950841	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4029163	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4029164	1.00[ASN][1000 genomes]
rs4029165	0.83[EUR][1000 genomes]
rs4029166	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4029167	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4494654	0.98[EUR][1000 genomes]
rs4514792	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs4803563	0.91[EUR][1000 genomes]
rs4803564	0.91[EUR][1000 genomes]
rs55717966	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55780983	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62112903	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62112904	0.81[EUR][1000 genomes]
rs6509049	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6509051	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6509052	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6509053	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6509054	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7246092	0.92[EUR][1000 genomes]
rs7246141	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7246428	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7246662	0.91[EUR][1000 genomes]
rs7246771	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7246855	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7248256	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7249825	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7251480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7255021	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7255373	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7255423	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7257768	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8102759	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8102971	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8103079	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8103457	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8105730	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8106280	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8110988	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9789252	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9797816	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:624 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422471	chr19:42733141-43669485	Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
2	esv2422468	chr19:42991289-43669027	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	esv2758501	chr19:43042747-43899053	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	esv2758763	chr19:43042747-43899053	Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
5	nsv428023	chr19:43042747-43899053	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	esv2422227	chr19:43059426-43669485	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
7	nsv1056270	chr19:43139043-43542819	Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
8	nsv544007	chr19:43141984-43529861	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv1061798	chr19:43141984-43741311	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
10	nsv544008	chr19:43141984-43741311	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
11	esv2754239	chr19:43145417-43559330	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
12	esv2757697	chr19:43164418-43870887	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
13	nsv1055872	chr19:43173614-44075193	Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
14	nsv544009	chr19:43173614-44075193	Enhancers ZNF genes & repeats Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
15	nsv544010	chr19:43173814-43584478	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
16	nsv544011	chr19:43173814-43741311	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
17	esv2751786	chr19:43198035-43685930	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
18	nsv516973	chr19:43202770-43866823	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
19	nsv869916	chr19:43203105-43584433	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
20	nsv869571	chr19:43203105-43802656	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
21	nsv869565	chr19:43203105-43810421	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
22	nsv963056	chr19:43203249-43798708	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
23	nsv9730	chr19:43203459-43802656	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
24	esv1812820	chr19:43203937-43803388	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
25	esv1808074	chr19:43214215-43805847	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
26	esv1813803	chr19:43214415-43805651	Active TSS ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
27	esv2763121	chr19:43215328-43846394	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
28	esv1846846	chr19:43225921-43774853	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
29	esv1805299	chr19:43227458-43790318	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
30	nsv911810	chr19:43233048-43629573	Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
31	esv2760524	chr19:43237611-43805328	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
32	esv34661	chr19:43240379-43673190	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
33	esv2751787	chr19:43240379-43685930	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
34	esv2751788	chr19:43240379-43711592	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
35	nsv432049	chr19:43240379-43711592	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
36	esv2751789	chr19:43240379-43731159	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
37	nsv432050	chr19:43240379-43777571	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
38	esv2751790	chr19:43240379-43805328	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
39	nsv529148	chr19:43242595-43530001	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
40	nsv1067715	chr19:43242795-43741310	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
41	nsv529386	chr19:43242795-43741310	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
42	nsv916162	chr19:43242811-43529887	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
43	nsv916623	chr19:43242811-43584499	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
44	nsv497975	chr19:43242811-43741714	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
45	nsv911811	chr19:43247348-43806559	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
46	nsv1066158	chr19:43255205-43542819	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
47	nsv911813	chr19:43257015-43621157	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
48	nsv544012	chr19:43260648-43584632	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
49	nsv544013	chr19:43260648-43741450	Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
50	nsv544014	chr19:43260649-43584633	Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:43521000-43525400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr19:43522600-43526000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr19:43523800-43524200	Weak transcription	Placenta	Placenta

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