The 2.0 version of rSNPBase

Variant report

Variant rs10778895
Chromosome Location chr12:82755341-82755342
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:82753200-82755400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:82753200-82755400 Weak transcription Gastric stomach
3 chr12:82753200-82755400 Weak transcription Spleen Spleen
4 chr12:82753200-82756000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr12:82753200-82767200 Weak transcription Aorta Aorta
6 chr12:82753200-82767800 Weak transcription Esophagus oesophagus
7 chr12:82753200-82767800 Weak transcription Lung lung
8 chr12:82753400-82755400 Weak transcription Hela-S3 cervix
9 chr12:82753400-82755800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr12:82753400-82756800 Weak transcription H1 Cell Line embryonic stem cell
11 chr12:82753400-82756800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr12:82753400-82756800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr12:82753400-82761400 Weak transcription Brain Anterior Caudate brain
14 chr12:82753400-82763000 Weak transcription Primary hematopoietic stem cells blood
15 chr12:82753400-82763200 Weak transcription Placenta Placenta
16 chr12:82753400-82763800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr12:82753400-82765200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr12:82753400-82765400 Weak transcription Primary T cells fromperipheralblood blood
19 chr12:82753400-82767400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr12:82753400-82767800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr12:82753400-82767800 Weak transcription Thymus Thymus
22 chr12:82753400-82768600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr12:82753400-82786200 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr12:82753600-82756800 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr12:82753600-82758000 Weak transcription Left Ventricle heart
26 chr12:82753600-82758000 Weak transcription Psoas Muscle Psoas
27 chr12:82753600-82758000 Weak transcription HSMM muscle
28 chr12:82753600-82763400 Weak transcription Fetal Intestine Large intestine
29 chr12:82753600-82763400 Weak transcription Fetal Muscle Leg muscle
30 chr12:82753600-82767600 Weak transcription Primary B cells from cord blood blood
31 chr12:82753600-82777800 Weak transcription Rectal Smooth Muscle rectum
32 chr12:82753600-82782400 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr12:82753600-82799800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:82753600-82805200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr12:82753800-82755600 Weak transcription Primary B cells from peripheral blood blood
36 chr12:82753800-82756400 Weak transcription A549 lung
37 chr12:82753800-82756800 Weak transcription HSMMtube muscle
38 chr12:82753800-82757000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr12:82753800-82758000 Weak transcription Muscle Satellite Cultured Cells --
40 chr12:82753800-82758000 Weak transcription Right Atrium heart
41 chr12:82753800-82759800 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr12:82753800-82760000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr12:82753800-82761600 Weak transcription Stomach Mucosa stomach
44 chr12:82753800-82763000 Weak transcription Primary T cells from cord blood blood
45 chr12:82753800-82763200 Weak transcription Fetal Intestine Small intestine
46 chr12:82753800-82763400 Weak transcription Duodenum Mucosa Duodenum
47 chr12:82753800-82767200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr12:82753800-82767600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr12:82753800-82767600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr12:82753800-82770800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015