The 2.0 version of rSNPBase

Variant report

Variant rs73153577
Chromosome Location chr12:82871728-82871729
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:82832400-82873400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr12:82834000-82874400 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr12:82837800-82876400 Weak transcription Psoas Muscle Psoas
4 chr12:82862800-82873000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:82867600-82873000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr12:82867800-82872000 Weak transcription Stomach Smooth Muscle stomach
7 chr12:82867800-82874400 Weak transcription Primary B cells from cord blood blood
8 chr12:82868000-82873000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr12:82868000-82874600 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr12:82868200-82872000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr12:82868200-82872000 Weak transcription GM12878-XiMat blood
12 chr12:82868200-82873800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr12:82868400-82874000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr12:82868600-82873600 Weak transcription Primary B cells from peripheral blood blood
15 chr12:82869000-82872200 Weak transcription Liver Liver
16 chr12:82869000-82873000 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr12:82869000-82876000 Weak transcription Adipose Nuclei Adipose
18 chr12:82869200-82873000 Weak transcription NH-A brain
19 chr12:82869200-82873200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr12:82869200-82873200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr12:82869200-82873200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr12:82869200-82873200 Weak transcription NHEK skin
23 chr12:82870400-82873200 Weak transcription HUVEC blood vessel
24 chr12:82870600-82872000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr12:82871000-82871800 Strong transcription Primary monocytes fromperipheralblood blood
26 chr12:82871000-82872000 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr12:82871600-82871800 Enhancers iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015