The 2.0 version of rSNPBase

Variant report

Variant rs17775025
Chromosome Location chr12:82802059-82802060
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:82753600-82805200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:82753800-82804800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr12:82754000-82804600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr12:82754200-82803600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr12:82754400-82804000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr12:82755600-82802200 Weak transcription Pancreas Pancrea
7 chr12:82758400-82835600 Weak transcription Psoas Muscle Psoas
8 chr12:82768400-82811600 Weak transcription Fetal Stomach stomach
9 chr12:82769200-82804400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:82769200-82809200 Weak transcription Lung lung
11 chr12:82779800-82808000 Weak transcription Brain Hippocampus Middle brain
12 chr12:82780400-82810800 Weak transcription Fetal Brain Male brain
13 chr12:82780800-82803200 Weak transcription GM12878-XiMat blood
14 chr12:82782200-82806200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr12:82782400-82805400 Weak transcription HSMM muscle
16 chr12:82783000-82805000 Weak transcription Primary hematopoietic stem cells blood
17 chr12:82783000-82813200 Weak transcription Gastric stomach
18 chr12:82783000-82838000 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr12:82783200-82811800 Weak transcription Fetal Lung lung
20 chr12:82785000-82803200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr12:82785000-82805600 Weak transcription Stomach Smooth Muscle stomach
22 chr12:82786600-82803000 Weak transcription Fetal Intestine Large intestine
23 chr12:82787400-82805400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr12:82789200-82833800 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr12:82791000-82806400 Weak transcription Brain Anterior Caudate brain
26 chr12:82791200-82852000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr12:82793400-82812800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr12:82793400-82834400 Weak transcription Liver Liver
29 chr12:82793600-82802600 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr12:82793600-82804600 Weak transcription Primary monocytes fromperipheralblood blood
31 chr12:82793600-82805200 Weak transcription Primary T cells fromperipheralblood blood
32 chr12:82793600-82813200 Weak transcription Primary B cells from peripheral blood blood
33 chr12:82793600-82833000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr12:82793600-82833200 Weak transcription Primary B cells from cord blood blood
35 chr12:82793800-82809000 Weak transcription Adipose Nuclei Adipose
36 chr12:82799000-82812600 Weak transcription Fetal Intestine Small intestine
37 chr12:82800400-82802200 Enhancers Aorta Aorta
38 chr12:82800400-82802200 Enhancers Ovary ovary
39 chr12:82800400-82802800 Enhancers Hela-S3 cervix
40 chr12:82800400-82802800 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr12:82801000-82802800 Strong transcription Primary T cells from cord blood blood
42 chr12:82801000-82803600 Strong transcription Left Ventricle heart
43 chr12:82801000-82811600 Weak transcription Small Intestine intestine
44 chr12:82801400-82802200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr12:82801400-82803400 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr12:82801400-82803600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr12:82801400-82803600 Weak transcription Duodenum Mucosa Duodenum
48 chr12:82801600-82812400 Weak transcription Fetal Heart heart
49 chr12:82801800-82802600 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015