Variant report
Variant | rs10783281 |
---|---|
Chromosome Location | chr12:49133361-49133362 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:49130555..49133453-chr12:49139757..49141371,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10783275 | 0.85[EUR][1000 genomes] |
rs10783278 | 0.86[EUR][1000 genomes] |
rs10875861 | 0.88[EUR][1000 genomes] |
rs10875869 | 0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10875870 | 0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10875871 | 0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1110432 | 0.81[EUR][1000 genomes] |
rs11168713 | 0.85[ASN][1000 genomes] |
rs11168714 | 0.84[ASN][1000 genomes] |
rs12172773 | 0.80[ASN][1000 genomes] |
rs12426435 | 0.81[EUR][1000 genomes] |
rs12810920 | 0.97[ASN][1000 genomes] |
rs1863541 | 0.81[EUR][1000 genomes] |
rs2277366 | 0.86[EUR][1000 genomes] |
rs2409085 | 0.81[EUR][1000 genomes] |
rs2898087 | 0.81[EUR][1000 genomes] |
rs3741629 | 0.81[EUR][1000 genomes] |
rs3741630 | 0.86[EUR][1000 genomes] |
rs3741632 | 0.87[EUR][1000 genomes] |
rs3803025 | 0.87[EUR][1000 genomes] |
rs3943899 | 0.81[EUR][1000 genomes] |
rs4760740 | 0.86[EUR][1000 genomes] |
rs6580690 | 0.81[EUR][1000 genomes] |
rs6580693 | 0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs7138190 | 0.81[EUR][1000 genomes] |
rs7299276 | 0.86[EUR][1000 genomes] |
rs7305907 | 0.94[EUR][1000 genomes] |
rs7306604 | 0.88[EUR][1000 genomes] |
rs7308699 | 0.88[EUR][1000 genomes] |
rs7314665 | 0.81[EUR][1000 genomes] |
rs7954446 | 0.94[EUR][1000 genomes] |
rs7964546 | 0.89[EUR][1000 genomes] |
rs7966065 | 0.81[EUR][1000 genomes] |
rs7974625 | 0.93[EUR][1000 genomes] |
rs7975030 | 0.94[EUR][1000 genomes] |
rs9634241 | 0.81[EUR][1000 genomes] |
rs9634262 | 0.81[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3332169 | chr12:49005807-49150691 | Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 43 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:49133200-49133400 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin03 | Skin |