Variant report

Variant	rs10791454
Chromosome Location	chr11:101137005-101137006
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10791445	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs10895075	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs10895078	0.83[AMR][1000 genomes]
rs10895087	0.81[ASN][1000 genomes]
rs11224642	0.89[AMR][1000 genomes]
rs11224654	0.83[AMR][1000 genomes]
rs11224676	0.90[ASN][1000 genomes]
rs11224690	0.84[ASN][1000 genomes]
rs17737701	0.91[EUR][1000 genomes]
rs1942836	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2000743	0.87[AMR][1000 genomes]
rs4754742	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs7931365	0.83[AMR][1000 genomes]
rs7937587	0.84[ASN][1000 genomes]
rs7945269	0.81[AMR][1000 genomes]
rs7948090	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556131	chr11:100985777-101480017	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv530644	chr11:101010088-101486038	Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	esv2753322	chr11:101052790-101311790	Flanking Bivalent TSS/Enh Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv832247	chr11:101123483-101298787	Bivalent Enhancer ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101126400-101169400	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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