Variant report

Variant	rs10792850
Chromosome Location	chr11:86067286-86067287
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10792848	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10792851	0.96[ASN][1000 genomes]
rs10898465	0.89[EUR][1000 genomes]
rs10898469	0.88[EUR][1000 genomes]
rs11234607	0.88[AMR][1000 genomes]
rs11234610	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11234622	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11601568	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11603237	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11824436	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11826971	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12224439	0.90[EUR][1000 genomes]
rs12224449	0.96[AMR][1000 genomes]
rs12224453	0.91[EUR][1000 genomes]
rs1584722	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs34675041	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6592284	0.91[ASN][1000 genomes]
rs6592285	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7106664	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7123096	0.84[AMR][1000 genomes]
rs71465631	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86047800-86067800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr11:86048400-86070200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:86049400-86067800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr11:86049600-86067600	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr11:86049800-86068000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr11:86050000-86072000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr11:86050600-86068200	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr11:86058000-86067600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr11:86058200-86071200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr11:86058400-86067600	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr11:86058600-86069800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr11:86058600-86070000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr11:86066800-86067600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:86066800-86070000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr11:86067000-86074600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr11:86067000-86081200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr11:86067200-86070800	Weak transcription	HUVEC	blood vessel

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