Variant report

Variant	rs10806229
Chromosome Location	chr6:82347389-82347390
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11752435	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12214288	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1341220	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13437553	0.82[EUR][1000 genomes]
rs1917063	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4324818	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6454229	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6454237	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs719144	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7763102	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7771821	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9294235	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9341895	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9344208	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9344211	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9344214	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9344215	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9361847	0.86[EUR][1000 genomes]
rs9449361	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82318000-82356600	Weak transcription	Aorta	Aorta
2	chr6:82344800-82348600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:82345200-82348400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:82346600-82347400	Enhancers	Muscle Satellite Cultured Cells	--
5	chr6:82346600-82347600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:82346800-82348600	Weak transcription	Placenta Amnion	Placenta Amnion

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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