Variant report

Variant	rs10828439
Chromosome Location	chr10:23683976-23683977
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10458696	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10458697	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10458698	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10458699	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10458700	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10458701	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10458702	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10764401	1.00[EUR][1000 genomes]
rs10828438	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10828442	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10828443	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10828444	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10828445	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10828446	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10828447	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10828448	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10828449	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013435	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.90[GIH][hapmap];0.90[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11013439	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11013440	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11013442	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11013443	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11013445	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013448	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013449	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013450	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013451	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013452	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013453	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013454	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013456	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1110308	0.82[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1110309	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11595979	0.89[EUR][1000 genomes]
rs11598035	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11598831	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11817475	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11819219	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12049727	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12049728	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12221365	1.00[CEU][hapmap];1.00[GIH][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12573322	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1511827	0.81[EUR][1000 genomes]
rs2012456	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs34324518	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34842656	0.94[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35353501	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35634725	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6482272	0.86[ASN][1000 genomes]
rs68065182	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7076002	0.80[ASN][1000 genomes]
rs72648297	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72648298	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72648299	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72648300	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72648301	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7900169	0.90[EUR][1000 genomes]
rs7916332	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs883850	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs883851	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23683400-23684200	Enhancers	Primary monocytes fromperipheralblood	blood

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