Variant report

Variant	rs1511827
Chromosome Location	chr10:23663413-23663414
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10458696	0.83[EUR][1000 genomes]
rs10458697	0.83[EUR][1000 genomes]
rs10458698	0.83[EUR][1000 genomes]
rs10458699	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10458700	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10458701	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10458702	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10764401	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10828437	0.84[ASN][1000 genomes]
rs10828438	0.86[EUR][1000 genomes]
rs10828439	0.81[EUR][1000 genomes]
rs10828446	0.83[EUR][1000 genomes]
rs10828447	0.83[EUR][1000 genomes]
rs10828448	0.83[EUR][1000 genomes]
rs10828449	1.00[CEU][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013435	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs11013445	0.83[EUR][1000 genomes]
rs11013448	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013449	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013450	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013451	0.83[EUR][1000 genomes]
rs11013452	1.00[CEU][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013453	1.00[CEU][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013454	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013456	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11013458	0.80[ASN][1000 genomes]
rs1110308	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1110309	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11595979	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11598831	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11817475	0.83[EUR][1000 genomes]
rs11819219	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12049727	0.84[EUR][1000 genomes]
rs12049728	0.86[EUR][1000 genomes]
rs12221155	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12221365	1.00[CEU][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12573322	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34324518	0.80[ASN][1000 genomes]
rs34842656	0.80[ASN][1000 genomes]
rs35353501	0.80[ASN][1000 genomes]
rs35634725	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs68065182	0.82[EUR][1000 genomes]
rs7068798	0.85[ASN][1000 genomes]
rs7087405	0.83[ASN][1000 genomes]
rs72648298	0.83[EUR][1000 genomes]
rs72648299	0.83[EUR][1000 genomes]
rs72648301	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7900169	0.84[EUR][1000 genomes]
rs7916332	0.86[EUR][1000 genomes]
rs883850	0.83[EUR][1000 genomes]
rs883851	1.00[CEU][hapmap];0.83[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23656800-23664800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr10:23658400-23668000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr10:23659600-23664400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:23661400-23665400	Enhancers	HMEC	breast
5	chr10:23661600-23664600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr10:23661800-23663600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr10:23661800-23666000	Enhancers	Hela-S3	cervix
8	chr10:23662200-23663600	Enhancers	Dnd41	blood
9	chr10:23662200-23663600	Enhancers	NHEK	skin
10	chr10:23662400-23663600	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr10:23662800-23663600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr10:23662800-23663600	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr10:23663000-23663600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr10:23663400-23664400	Weak transcription	Primary monocytes fromperipheralblood	blood

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