The 2.0 version of rSNPBase

Variant report

Variant rs10829009
Chromosome Location chr10:18899868-18899869
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18848400-18915800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr10:18849800-18910800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr10:18863000-18910800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr10:18863800-18902200 Weak transcription Brain Anterior Caudate brain
5 chr10:18867800-18900400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr10:18867800-18916400 Weak transcription H9 Cell Line embryonic stem cell
7 chr10:18868000-18902200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr10:18868000-18916200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr10:18868200-18904800 Weak transcription HSMMtube muscle
10 chr10:18869800-18910800 Weak transcription Right Ventricle heart
11 chr10:18870200-18900600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr10:18870600-18908400 Weak transcription Brain Substantia Nigra brain
13 chr10:18870600-18916000 Weak transcription Rectal Smooth Muscle rectum
14 chr10:18871600-18910000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr10:18872800-18916000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr10:18873200-18908200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr10:18873600-18916000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr10:18875000-18916000 Weak transcription Brain Cingulate Gyrus brain
19 chr10:18875600-18900600 Weak transcription Esophagus oesophagus
20 chr10:18875600-18912600 Weak transcription Stomach Smooth Muscle stomach
21 chr10:18877200-18916200 Weak transcription Thymus Thymus
22 chr10:18877200-18916400 Weak transcription Spleen Spleen
23 chr10:18877400-18916200 Weak transcription Pancreas Pancrea
24 chr10:18877400-18916400 Weak transcription Psoas Muscle Psoas
25 chr10:18877600-18900000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr10:18877600-18916400 Weak transcription Gastric stomach
27 chr10:18878000-18915600 Weak transcription H1 Cell Line embryonic stem cell
28 chr10:18881400-18916400 Weak transcription Brain Angular Gyrus brain
29 chr10:18882000-18916200 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr10:18884200-18900200 Weak transcription Fetal Brain Female brain
31 chr10:18884200-18900400 Weak transcription Ovary ovary
32 chr10:18884200-18900600 Weak transcription Brain Germinal Matrix brain
33 chr10:18884200-18916400 Weak transcription Aorta Aorta
34 chr10:18884400-18900600 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr10:18884600-18900200 Weak transcription Fetal Thymus thymus
36 chr10:18884600-18916400 Weak transcription Brain Hippocampus Middle brain
37 chr10:18884800-18909400 Weak transcription Primary hematopoietic stem cells blood
38 chr10:18885200-18901200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr10:18885200-18904400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr10:18885400-18900200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr10:18885400-18900600 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr10:18885400-18916200 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr10:18885400-18916400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr10:18891000-18900600 Weak transcription Fetal Muscle Trunk muscle
45 chr10:18891600-18916400 Weak transcription Lung lung
46 chr10:18892400-18902400 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr10:18894200-18901200 Strong transcription Dnd41 blood
48 chr10:18894800-18900800 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr10:18895400-18900600 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr10:18895400-18901000 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015