Variant report

Variant	rs6482533
Chromosome Location	chr10:18867838-18867839
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 165 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:149)

rs_ID	r²[population]
rs10400076	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10430567	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs1055116	1.00[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10734063	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10741091	0.92[CEU][hapmap];0.85[JPT][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10741111	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10741115	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10741127	0.92[CEU][hapmap];0.98[TSI][hapmap];0.84[YRI][hapmap]
rs10741129	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10741132	0.86[AMR][1000 genomes]
rs10764582	0.91[CEU][hapmap];0.88[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10764583	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs10764600	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10764601	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10764602	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10764603	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10764604	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10764605	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10764625	1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]
rs10764640	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10764691	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10828851	0.92[CEU][hapmap];0.84[CHB][hapmap];0.85[CHD][hapmap];0.82[GIH][hapmap];0.90[JPT][hapmap];0.89[MEX][hapmap];0.93[TSI][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10828870	0.85[ASW][hapmap];0.92[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.81[LWK][hapmap];0.89[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10828871	0.90[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[YRI][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10828872	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10828896	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10828911	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10828965	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10828967	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs10828975	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10828983	0.98[ASN][1000 genomes]
rs10828984	0.82[ASN][1000 genomes]
rs10828991	0.96[ASN][1000 genomes]
rs10829009	0.96[ASN][1000 genomes]
rs10829022	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10829037	0.86[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.95[YRI][hapmap];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10829039	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10829040	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10829058	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829060	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10829070	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10829148	0.83[EUR][1000 genomes]
rs10829151	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10829213	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11014892	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11014981	0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs11015048	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11015077	0.98[ASN][1000 genomes]
rs11015105	0.82[ASN][1000 genomes]
rs11015196	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11015255	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11015312	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11015421	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11511084	0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs11525266	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11540309	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs11593617	0.92[ASN][1000 genomes]
rs11812341	0.89[ASN][1000 genomes]
rs11815228	0.94[CHB][hapmap];0.86[JPT][hapmap];0.92[ASN][1000 genomes]
rs12219183	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12359758	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12569474	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12569487	0.83[AFR][1000 genomes]
rs12762481	0.81[CHD][hapmap];0.95[JPT][hapmap]
rs12765238	0.82[ASN][1000 genomes]
rs12766105	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12766314	0.85[CHD][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs12767923	0.95[JPT][hapmap]
rs12769425	0.95[JPT][hapmap]
rs12770851	0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs12772522	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs12775419	0.82[ASN][1000 genomes]
rs12778035	0.95[JPT][hapmap]
rs12779694	0.82[ASN][1000 genomes]
rs12781208	0.95[JPT][hapmap]
rs12784986	0.81[CHD][hapmap];0.95[JPT][hapmap]
rs12785031	0.94[CHB][hapmap];0.90[JPT][hapmap];0.88[ASN][1000 genomes]
rs2171922	0.84[JPT][hapmap]
rs2228645	0.82[CHD][hapmap];0.90[JPT][hapmap]
rs2272274	0.85[ASW][hapmap];0.91[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.81[LWK][hapmap];0.94[MEX][hapmap];0.84[MKK][hapmap];0.93[TSI][hapmap];0.87[YRI][hapmap];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3740102	0.93[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.89[MEX][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3740104	0.95[JPT][hapmap]
rs3817494	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.85[MEX][hapmap];0.84[MKK][hapmap];0.91[TSI][hapmap];0.96[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4237349	0.95[JPT][hapmap]
rs4310518	0.89[JPT][hapmap]
rs4314963	0.85[JPT][hapmap]
rs4445544	0.94[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4468242	0.81[CHD][hapmap];0.95[JPT][hapmap]
rs4747349	0.80[EUR][1000 genomes]
rs4747350	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4748481	0.82[JPT][hapmap]
rs4748483	0.89[TSI][hapmap]
rs4748488	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4748490	0.83[ASN][1000 genomes]
rs4748492	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4748496	0.95[JPT][hapmap]
rs4748497	0.83[ASN][1000 genomes]
rs4748499	0.95[JPT][hapmap]
rs4748509	0.86[AMR][1000 genomes]
rs5022622	1.00[CHB][hapmap];0.94[CHD][hapmap];0.90[JPT][hapmap];0.96[ASN][1000 genomes]
rs56410858	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs57066269	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57579336	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62634837	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs62634838	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs62636218	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6482515	0.84[CHD][hapmap];0.89[JPT][hapmap]
rs6482597	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.82[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.87[YRI][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7071300	0.82[ASN][1000 genomes]
rs7072624	0.95[JPT][hapmap]
rs7072963	0.95[JPT][hapmap]
rs7074644	0.82[ASN][1000 genomes]
rs7075135	0.82[ASN][1000 genomes]
rs7077722	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7079325	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7081461	0.95[CHB][hapmap];0.91[CHD][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs7081690	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7081977	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7085318	0.92[ASN][1000 genomes]
rs7086757	0.82[ASN][1000 genomes]
rs7087030	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7088091	0.92[CEU][hapmap];0.84[CHB][hapmap];0.88[CHD][hapmap];0.82[GIH][hapmap];0.90[JPT][hapmap];0.84[LWK][hapmap];0.89[MEX][hapmap];0.84[MKK][hapmap];0.95[TSI][hapmap]
rs7093454	0.92[ASN][1000 genomes]
rs7096923	0.95[JPT][hapmap]
rs7099260	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7099423	0.95[JPT][hapmap]
rs7100880	0.81[ASW][hapmap];0.82[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs72787951	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs72787963	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7477076	0.95[ASN][1000 genomes]
rs7894016	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7895784	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.86[MKK][hapmap];0.86[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7897159	0.85[JPT][hapmap]
rs7898513	0.85[JPT][hapmap]
rs7898781	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7899017	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7901598	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7904016	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs7904263	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7904949	0.83[CHB][hapmap];0.94[JPT][hapmap]
rs7905365	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs7907891	0.92[ASN][1000 genomes]
rs7909570	0.87[AMR][1000 genomes]
rs7909845	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7917584	0.91[CEU][hapmap];0.85[JPT][hapmap];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7919487	0.93[ASN][1000 genomes]
rs7922550	0.92[CEU][hapmap];0.90[JPT][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7922829	0.92[CEU][hapmap];0.84[CHB][hapmap];0.90[JPT][hapmap];0.87[YRI][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7923480	0.94[CHB][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550042	chr10:18683267-18994583	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	esv34545	chr10:18821185-18908294	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	esv1793653	chr10:18827828-18888369	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
4	esv1794817	chr10:18827828-18888369	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
5	esv1811259	chr10:18827828-18888369	ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	esv1840241	chr10:18827828-18888369	Enhancers Strong transcription ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
7	esv1841068	chr10:18827828-18888369	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
8	esv1851495	chr10:18827828-18888369	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
9	esv1835982	chr10:18833550-18872699	Genic enhancers Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
10	esv2757371	chr10:18835325-18906507	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
11	esv2759736	chr10:18835325-18906507	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
12	nsv466760	chr10:18839350-18905935	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
13	nsv550044	chr10:18839350-18905935	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
14	esv1845973	chr10:18841795-18872699	Strong transcription ZNF genes & repeats Weak transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
15	esv1793359	chr10:18841795-18872872	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
16	esv1801825	chr10:18853581-18872699	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs6482533	RP11-499P20.2	cis	Esophagus Mucosa	GTEx
rs6482533	NSUN6	cis	cerebellum	SCAN
rs6482533	RP11-499P20.2	cis	Nerve Tibial	GTEx
rs6482533	ARL5B	cis	multi-tissue	Pritchard
rs6482533	RP11-499P20.2	cis	Thyroid	GTEx
rs6482533	RP11-499P20.2	cis	lung	GTEx
rs6482533	RP11-499P20.2	cis	Skin Sun Exposed Lower leg	GTEx
rs6482533	NSUN6	cis	lung	GTEx
rs6482533	RP11-499P20.2	cis	Whole Blood	GTEx
rs6482533	NSUN6	cis	parietal	SCAN
rs6482533	ARL5B	cis	Whole Blood	GTEx
rs6482533	TRDMT1	cis	parietal	SCAN

Chromatin state (count:101 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18842000-18868400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr10:18842000-18869200	Weak transcription	Stomach Smooth Muscle	stomach
3	chr10:18842000-18886400	Weak transcription	Colon Smooth Muscle	Colon
4	chr10:18844000-18871000	Weak transcription	Fetal Heart	heart
5	chr10:18846200-18899200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr10:18848400-18915800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
7	chr10:18849000-18868600	Weak transcription	Gastric	stomach
8	chr10:18849800-18910800	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr10:18859600-18868600	Weak transcription	K562	blood
10	chr10:18861000-18883200	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr10:18861800-18869000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:18862200-18868800	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr10:18862200-18894600	Weak transcription	HSMM	muscle
14	chr10:18862400-18878400	Strong transcription	Liver	Liver
15	chr10:18862600-18869200	Weak transcription	Fetal Brain Male	brain
16	chr10:18862600-18876600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr10:18863000-18894600	Weak transcription	A549	lung
18	chr10:18863000-18910800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr10:18863200-18876400	Weak transcription	Spleen	Spleen
20	chr10:18863600-18875200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr10:18863800-18869000	Weak transcription	HepG2	liver
22	chr10:18863800-18869200	Weak transcription	Rectal Smooth Muscle	rectum
23	chr10:18863800-18902200	Weak transcription	Brain Anterior Caudate	brain
24	chr10:18864800-18870800	Strong transcription	Ovary	ovary
25	chr10:18864800-18898000	Weak transcription	Fetal Kidney	kidney
26	chr10:18865000-18869600	Weak transcription	Brain Substantia Nigra	brain
27	chr10:18865200-18869200	Weak transcription	Brain Germinal Matrix	brain
28	chr10:18865600-18868600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
29	chr10:18865600-18869000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr10:18865600-18870600	Strong transcription	Primary T helper cells PMA-I stimulated	--
31	chr10:18865600-18885000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr10:18865800-18869800	Weak transcription	Fetal Brain Female	brain
33	chr10:18866000-18868200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
34	chr10:18866000-18869000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr10:18866000-18869800	Weak transcription	Brain Hippocampus Middle	brain
36	chr10:18866200-18868000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
37	chr10:18866200-18868000	Strong transcription	Duodenum Smooth Muscle	Duodenum
38	chr10:18866200-18868000	Strong transcription	Fetal Lung	lung
39	chr10:18866200-18869000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr10:18866200-18869200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr10:18866400-18868600	Weak transcription	Adipose Nuclei	Adipose
42	chr10:18866400-18869000	Weak transcription	Right Ventricle	heart
43	chr10:18866600-18868000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr10:18866600-18868000	ZNF genes & repeats	Dnd41	blood
45	chr10:18866600-18869200	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
46	chr10:18866600-18869400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
47	chr10:18866600-18899400	Weak transcription	Placenta Amnion	Placenta Amnion
48	chr10:18866800-18868000	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
49	chr10:18866800-18868000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr10:18866800-18869200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood

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