The 2.0 version of rSNPBase

Variant report

Variant rs10829094
Chromosome Location chr10:27128878-27128879
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27095000-27130600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr10:27095000-27138600 Weak transcription Fetal Muscle Trunk muscle
3 chr10:27095400-27129800 Weak transcription NHEK skin
4 chr10:27095600-27129000 Weak transcription Right Atrium heart
5 chr10:27095600-27132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr10:27095600-27148800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr10:27101800-27129000 Weak transcription Stomach Mucosa stomach
8 chr10:27104800-27129200 Weak transcription Colonic Mucosa Colon
9 chr10:27107000-27129000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr10:27107400-27129000 Weak transcription Spleen Spleen
11 chr10:27109400-27132600 Weak transcription HMEC breast
12 chr10:27110000-27130400 Weak transcription HUVEC blood vessel
13 chr10:27111800-27129000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr10:27111800-27129200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr10:27111800-27147000 Weak transcription Fetal Intestine Large intestine
16 chr10:27112000-27130400 Weak transcription Muscle Satellite Cultured Cells --
17 chr10:27112400-27129000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr10:27112800-27129000 Weak transcription Primary B cells from cord blood blood
19 chr10:27112800-27129000 Weak transcription Brain Anterior Caudate brain
20 chr10:27112800-27129000 Weak transcription Small Intestine intestine
21 chr10:27119400-27129000 Weak transcription Aorta Aorta
22 chr10:27119600-27130400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr10:27119600-27133600 Weak transcription Thymus Thymus
24 chr10:27119600-27147200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr10:27120000-27129200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr10:27120600-27142600 Weak transcription HepG2 liver
27 chr10:27121000-27129800 Weak transcription Fetal Brain Female brain
28 chr10:27121200-27130800 Weak transcription Dnd41 blood
29 chr10:27122200-27129200 Weak transcription Colon Smooth Muscle Colon
30 chr10:27122400-27129200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr10:27122600-27129000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr10:27122600-27129200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr10:27122600-27133000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr10:27122600-27136800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr10:27122600-27143400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr10:27123000-27145000 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr10:27123800-27129000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr10:27124400-27146200 Weak transcription Fetal Muscle Leg muscle
39 chr10:27124800-27129000 Weak transcription Fetal Thymus thymus
40 chr10:27125000-27130400 Weak transcription Fetal Stomach stomach
41 chr10:27125000-27131600 Weak transcription Fetal Intestine Small intestine
42 chr10:27125600-27131600 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr10:27125800-27131000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr10:27126000-27129400 Enhancers Primary Natural Killer cells fromperipheralblood blood
45 chr10:27126000-27131600 Enhancers Primary B cells from peripheral blood blood
46 chr10:27126000-27131800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr10:27126200-27130600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr10:27126400-27131200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr10:27126400-27133400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr10:27126400-27133400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015