The 2.0 version of rSNPBase

Variant report

Variant rs9804395
Chromosome Location chr10:27120097-27120098
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27095000-27130600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr10:27095000-27138600 Weak transcription Fetal Muscle Trunk muscle
3 chr10:27095400-27129800 Weak transcription NHEK skin
4 chr10:27095600-27129000 Weak transcription Right Atrium heart
5 chr10:27095600-27132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr10:27095600-27148800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr10:27099800-27128800 Weak transcription K562 blood
8 chr10:27101800-27129000 Weak transcription Stomach Mucosa stomach
9 chr10:27104800-27129200 Weak transcription Colonic Mucosa Colon
10 chr10:27105000-27122000 Weak transcription Brain Cingulate Gyrus brain
11 chr10:27106600-27122000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr10:27107000-27129000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr10:27107400-27129000 Weak transcription Spleen Spleen
14 chr10:27108000-27120600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr10:27109400-27132600 Weak transcription HMEC breast
16 chr10:27110000-27130400 Weak transcription HUVEC blood vessel
17 chr10:27111400-27125200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr10:27111800-27129000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr10:27111800-27129200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr10:27111800-27147000 Weak transcription Fetal Intestine Large intestine
21 chr10:27112000-27121000 Weak transcription NHDF-Ad bronchial
22 chr10:27112000-27122000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr10:27112000-27126000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr10:27112000-27128800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr10:27112000-27130400 Weak transcription Muscle Satellite Cultured Cells --
26 chr10:27112200-27121000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr10:27112200-27121600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr10:27112400-27129000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr10:27112800-27120800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr10:27112800-27121600 Weak transcription Left Ventricle heart
31 chr10:27112800-27125000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr10:27112800-27129000 Weak transcription Primary B cells from cord blood blood
33 chr10:27112800-27129000 Weak transcription Brain Anterior Caudate brain
34 chr10:27112800-27129000 Weak transcription Small Intestine intestine
35 chr10:27115800-27124000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr10:27117600-27121800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr10:27118000-27124600 Enhancers Primary T helper cells PMA-I stimulated --
38 chr10:27118200-27120200 ZNF genes & repeats GM12878-XiMat blood
39 chr10:27118400-27120800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr10:27118400-27121200 Enhancers Primary T helper cells fromperipheralblood blood
41 chr10:27118600-27120200 Enhancers Primary monocytes fromperipheralblood blood
42 chr10:27118600-27120800 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr10:27118800-27120400 Enhancers Primary T cells fromperipheralblood blood
44 chr10:27118800-27121200 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr10:27119200-27120400 ZNF genes & repeats Fetal Intestine Small intestine
46 chr10:27119400-27120200 Enhancers Monocytes-CD14+_RO01746 blood
47 chr10:27119400-27120800 Weak transcription Fetal Lung lung
48 chr10:27119400-27129000 Weak transcription Aorta Aorta
49 chr10:27119600-27120200 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr10:27119600-27120200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015