Variant report

Variant	rs10849767
Chromosome Location	chr12:121034286-121034287
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 10 )

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10774555	0.85[EUR][1000 genomes]
rs10774560	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10774561	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10849754	0.80[EUR][1000 genomes]
rs10849757	0.83[EUR][1000 genomes]
rs10849758	0.85[EUR][1000 genomes]
rs10849759	0.85[EUR][1000 genomes]
rs10849766	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11065145	0.81[EUR][1000 genomes]
rs11065149	0.82[EUR][1000 genomes]
rs11065151	0.81[EUR][1000 genomes]
rs11065154	0.85[EUR][1000 genomes]
rs12309824	0.84[EUR][1000 genomes]
rs12312613	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12370495	0.84[EUR][1000 genomes]
rs12371550	0.84[EUR][1000 genomes]
rs12814055	0.83[EUR][1000 genomes]
rs3213565	0.84[EUR][1000 genomes]
rs3742052	0.84[EUR][1000 genomes]
rs4766968	0.82[EUR][1000 genomes]
rs4766969	0.84[EUR][1000 genomes]
rs4767906	0.81[EUR][1000 genomes]
rs4767910	0.83[EUR][1000 genomes]
rs4767911	0.82[EUR][1000 genomes]
rs4767912	0.84[EUR][1000 genomes]
rs4767914	0.84[EUR][1000 genomes]
rs4767916	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs509445	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs516479	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs523522	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs524735	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs546417	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55848094	0.84[EUR][1000 genomes]
rs56029862	0.82[EUR][1000 genomes]
rs579919	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs585510	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs603574	0.84[EUR][1000 genomes]
rs643372	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs651627	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs655530	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs670568	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs687873	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7136951	0.80[EUR][1000 genomes]
rs7471	0.81[EUR][1000 genomes]
rs7488320	0.84[EUR][1000 genomes]
rs9788155	0.80[EUR][1000 genomes]
rs9795621	0.82[EUR][1000 genomes]

mRNA abundance (count:10)

SNP	Gene	Cis/trans	Tissue	Source
rs10849767	COQ5	cis	Nerve Tibial	GTEx
rs10849767	COQ5	cis	Artery Aorta	GTEx
rs10849767	COQ5	cis	Muscle Skeletal	GTEx
rs10849767	COQ5	cis	lung	GTEx
rs10849767	COQ5	cis	Esophagus Muscularis	GTEx
rs10849767	COQ5	cis	Heart Left Ventricle	GTEx
rs10849767	COQ5	cis	Artery Tibial	GTEx
rs10849767	COQ5	cis	Skin Sun Exposed Lower leg	GTEx
rs10849767	COQ5	Cis_1M	lymphoblastoid	RTeQTL
rs10849767	COQ5	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121030200-121035200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:121030200-121037200	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr12:121031200-121035000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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