Variant report

Variant rs10854068
Chromosome Location chr19:23566484-23566485
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23513200-23570400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23524400-23570200 ZNF genes & repeats Liver Liver
3 chr19:23524600-23570000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
4 chr19:23544000-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:23549200-23568600 ZNF genes & repeats Duodenum Mucosa Duodenum
6 chr19:23549200-23570200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr19:23549200-23577000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:23549600-23576000 Weak transcription Hela-S3 cervix
9 chr19:23551600-23576400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr19:23552800-23576000 ZNF genes & repeats Dnd41 blood
11 chr19:23553000-23576400 ZNF genes & repeats Primary hematopoietic stem cells blood
12 chr19:23553000-23576800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
13 chr19:23553000-23577000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
14 chr19:23554200-23567600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr19:23555600-23576800 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:23556000-23566600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr19:23557200-23576600 Weak transcription H1 Cell Line embryonic stem cell
18 chr19:23558200-23573200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
19 chr19:23558600-23569000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
20 chr19:23559200-23570000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr19:23559400-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr19:23559600-23570600 ZNF genes & repeats Primary B cells from cord blood blood
23 chr19:23561400-23576600 ZNF genes & repeats Fetal Brain Female brain
24 chr19:23561600-23568400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
25 chr19:23561600-23569600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr19:23561600-23570000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
27 chr19:23561600-23570400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
28 chr19:23561600-23570600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
29 chr19:23561800-23568200 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
30 chr19:23561800-23570200 ZNF genes & repeats Primary T cells fromperipheralblood blood
31 chr19:23562600-23571000 ZNF genes & repeats Fetal Intestine Large intestine
32 chr19:23562800-23567200 Weak transcription HSMMtube muscle
33 chr19:23562800-23568200 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr19:23563400-23575400 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr19:23563600-23571200 Weak transcription Colon Smooth Muscle Colon
36 chr19:23564200-23568400 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
37 chr19:23564200-23568400 ZNF genes & repeats Brain Germinal Matrix brain
38 chr19:23564200-23568600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr19:23564200-23576600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:23564400-23568200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
41 chr19:23564600-23566600 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:23564600-23568600 Strong transcription Osteobl bone
43 chr19:23565000-23567800 ZNF genes & repeats HMEC breast
44 chr19:23565000-23569400 ZNF genes & repeats Primary B cells from peripheral blood blood
45 chr19:23565000-23570200 ZNF genes & repeats GM12878-XiMat blood
46 chr19:23565200-23568000 ZNF genes & repeats Fetal Brain Male brain
47 chr19:23565200-23568200 ZNF genes & repeats Fetal Muscle Leg muscle
48 chr19:23565200-23568400 ZNF genes & repeats HepG2 liver
49 chr19:23565200-23568400 ZNF genes & repeats NHEK skin
50 chr19:23565200-23569400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum

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