Variant report

Variant	rs10863093
Chromosome Location	chr12:86285792-86285793
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10779231	0.82[CEU][hapmap]
rs10863088	1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap]
rs11117072	0.84[JPT][hapmap]
rs11503287	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11513957	0.84[TSI][hapmap]
rs11834294	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12313658	0.98[LWK][hapmap];0.92[MKK][hapmap];0.96[YRI][hapmap]
rs1349063	0.93[YRI][hapmap]
rs28509446	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs55811543	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6539935	0.81[CEU][hapmap]
rs7133797	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7137122	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7305873	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049179	chr12:86056376-86799188	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv1797806	chr12:86198935-86425608	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:86285200-86286400	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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