Variant report

Variant	rs10867862
Chromosome Location	chr9:85224136-85224137
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10122746	0.94[EUR][1000 genomes]
rs10512132	0.94[ASN][1000 genomes]
rs10512133	0.92[ASN][1000 genomes]
rs11139640	0.82[EUR][1000 genomes]
rs11139646	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11139650	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11139652	0.94[ASN][1000 genomes]
rs11139653	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11139654	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11139661	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11139665	0.92[ASN][1000 genomes]
rs11139682	0.81[ASN][1000 genomes]
rs11139683	0.81[ASN][1000 genomes]
rs17085704	0.82[EUR][1000 genomes]
rs2001818	0.94[ASN][1000 genomes]
rs73648460	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73648462	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73648463	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73650741	0.82[EUR][1000 genomes]
rs7853040	0.94[ASN][1000 genomes]
rs7853471	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831641	chr9:85145561-85309589	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85221200-85227000	Weak transcription	Fetal Stomach	stomach

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links