Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1011308	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10868875	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11142539	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12344255	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12348503	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12352329	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12376453	0.87[ASN][1000 genomes]
rs12378618	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12380623	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17055479	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3908571	0.92[ASN][1000 genomes]
rs4131069	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4540466	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4744613	0.83[ASN][1000 genomes]
rs6560148	0.87[ASN][1000 genomes]
rs7027906	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7860003	0.87[ASN][1000 genomes]
rs7860377	0.86[ASN][1000 genomes]
rs7860736	0.86[ASN][1000 genomes]
rs7874138	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7875827	0.83[ASN][1000 genomes]
rs879857	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893440	chr9:73225802-73434585	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	76 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73295000-73298600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr9:73295800-73310400	Weak transcription	Pancreas	Pancrea
3	chr9:73297200-73298600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr9:73297400-73298000	Enhancers	Stomach Mucosa	stomach

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