Variant report

Variant	rs10898185
Chromosome Location	chr11:83658053-83658054
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10898182	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10898183	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10898184	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233815	1.00[CHB][hapmap];0.92[JPT][hapmap];0.97[ASN][1000 genomes]
rs11233817	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233818	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11233819	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11233820	1.00[ASN][1000 genomes]
rs11233821	1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[JPT][hapmap];1.00[ASN][1000 genomes]
rs11233822	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11233823	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233824	1.00[ASN][1000 genomes]
rs11233825	0.81[CEU][hapmap]
rs11233827	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11233830	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs11233831	1.00[ASN][1000 genomes]
rs11233832	1.00[ASN][1000 genomes]
rs11233837	1.00[ASN][1000 genomes]
rs11233839	0.81[CEU][hapmap]
rs11233840	0.85[CEU][hapmap]
rs11233841	0.81[CEU][hapmap]
rs11233842	0.96[ASN][1000 genomes]
rs11233845	0.81[CEU][hapmap]
rs11233847	0.82[CEU][hapmap]
rs11233848	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs11233853	0.81[CEU][hapmap];0.81[TSI][hapmap]
rs11233856	0.81[CEU][hapmap]
rs11233857	0.81[CEU][hapmap]
rs11233859	0.81[CEU][hapmap]
rs11233860	0.81[CEU][hapmap]
rs11233861	0.81[CEU][hapmap]
rs11233862	0.86[CEU][hapmap]
rs11233863	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs12222190	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12225678	1.00[ASN][1000 genomes]
rs12270426	0.81[CEU][hapmap];0.81[TSI][hapmap]
rs12272484	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs12273926	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs12278503	0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12279738	0.81[CEU][hapmap]
rs12283496	0.81[CEU][hapmap]
rs12288383	0.81[CEU][hapmap]
rs12288916	0.81[CEU][hapmap]
rs12291418	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs12292970	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs12295779	0.81[CEU][hapmap]
rs12295784	0.81[CEU][hapmap]
rs1319736	1.00[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1384753	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1384754	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs1384755	0.81[CEU][hapmap]
rs1483402	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs1483403	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs1483404	0.81[CEU][hapmap]
rs1483405	0.81[CEU][hapmap]
rs1483406	0.81[CEU][hapmap]
rs1483407	0.81[CEU][hapmap]
rs1483409	0.81[CEU][hapmap]
rs5006941	0.80[CEU][hapmap]
rs7105937	0.80[CEU][hapmap]
rs7107323	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs7116071	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs7131673	0.81[CEU][hapmap];0.86[TSI][hapmap]
rs790366	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7952093	0.81[CEU][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83629800-83661800	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:83639600-83659400	Weak transcription	Ovary	ovary
3	chr11:83649200-83662400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:83650400-83662400	Weak transcription	Brain Hippocampus Middle	brain
5	chr11:83657400-83659200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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