The 2.0 version of rSNPBase

Variant report

Variant rs10913962
Chromosome Location chr1:180265667-180265668
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180240800-180270800 Weak transcription NHLF lung
2 chr1:180242000-180268400 Weak transcription NHDF-Ad bronchial
3 chr1:180243800-180268200 Weak transcription Pancreas Pancrea
4 chr1:180244200-180270400 Weak transcription Muscle Satellite Cultured Cells --
5 chr1:180244200-180278200 Weak transcription HSMMtube muscle
6 chr1:180245200-180282400 Weak transcription Fetal Intestine Large intestine
7 chr1:180245400-180268200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:180245400-180280400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:180247800-180284200 Weak transcription Fetal Thymus thymus
10 chr1:180248000-180266800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:180248800-180276400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:180250400-180279800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:180250600-180278600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:180254400-180280400 Weak transcription Fetal Stomach stomach
15 chr1:180254600-180266200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:180254800-180282400 Weak transcription Fetal Muscle Leg muscle
17 chr1:180257400-180278200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:180257400-180278600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:180257600-180268000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:180257600-180268400 Weak transcription HSMM muscle
21 chr1:180257600-180270600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:180257600-180289600 Weak transcription Hela-S3 cervix
23 chr1:180257800-180265800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:180257800-180268000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:180257800-180278600 Weak transcription HMEC breast
26 chr1:180257800-180278600 Weak transcription NHEK skin
27 chr1:180257800-180279800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:180257800-180287200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr1:180257800-180296200 Weak transcription Left Ventricle heart
30 chr1:180258400-180285200 Weak transcription Ovary ovary
31 chr1:180259000-180271800 Weak transcription Primary T cells from cord blood blood
32 chr1:180259000-180278600 Weak transcription Brain Cingulate Gyrus brain
33 chr1:180259400-180268800 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:180259800-180266400 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:180261200-180284200 Weak transcription K562 blood
36 chr1:180262200-180266400 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:180262200-180270400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:180262200-180276000 Weak transcription Primary B cells from peripheral blood blood
39 chr1:180262400-180275000 Weak transcription Primary hematopoietic stem cells blood
40 chr1:180262800-180280000 Weak transcription Primary B cells from cord blood blood
41 chr1:180263200-180269000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:180263800-180266000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:180264000-180266200 Weak transcription H9 Cell Line embryonic stem cell
44 chr1:180264000-180278800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:180264200-180270000 Weak transcription Fetal Intestine Small intestine
46 chr1:180264600-180265800 Enhancers A549 lung
47 chr1:180264800-180267000 Enhancers Dnd41 blood
48 chr1:180265600-180277600 Weak transcription HepG2 liver

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Last update: Aug 31, 2015