The 2.0 version of rSNPBase

Variant report

Variant rs57465003
Chromosome Location chr1:180440038-180440039
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180392600-180446200 Weak transcription K562 blood
2 chr1:180403400-180448000 Weak transcription HMEC breast
3 chr1:180404400-180469000 Weak transcription Pancreas Pancrea
4 chr1:180421000-180448000 Weak transcription HSMM muscle
5 chr1:180421200-180451600 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:180425800-180457600 Weak transcription Aorta Aorta
7 chr1:180427400-180448200 Weak transcription Osteobl bone
8 chr1:180428000-180470000 Weak transcription Rectal Smooth Muscle rectum
9 chr1:180429600-180444600 Weak transcription Esophagus oesophagus
10 chr1:180429600-180455000 Weak transcription Left Ventricle heart
11 chr1:180430200-180454600 Weak transcription Thymus Thymus
12 chr1:180431200-180470200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:180431400-180447800 Weak transcription Fetal Stomach stomach
14 chr1:180431400-180448200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:180432000-180451400 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:180432000-180470600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:180432200-180448000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:180433600-180454200 Weak transcription Adipose Nuclei Adipose
19 chr1:180433800-180455000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:180434000-180448000 Weak transcription Duodenum Mucosa Duodenum
21 chr1:180434000-180465600 Weak transcription Fetal Brain Male brain
22 chr1:180434200-180445200 Weak transcription Dnd41 blood
23 chr1:180434200-180470200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:180434400-180440200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:180434400-180451400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:180434600-180444200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:180434600-180448000 Weak transcription Primary B cells from cord blood blood
28 chr1:180434600-180448000 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr1:180434600-180448000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:180434600-180448200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:180434600-180448200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:180434600-180448400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr1:180434800-180444400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:180434800-180444400 Weak transcription Fetal Intestine Small intestine
35 chr1:180434800-180451400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:180434800-180458800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:180435000-180448000 Weak transcription Fetal Lung lung
38 chr1:180435000-180456400 Weak transcription Fetal Kidney kidney
39 chr1:180435200-180440400 Weak transcription Primary hematopoietic stem cells blood
40 chr1:180435200-180441000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:180435200-180441600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:180435200-180448000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:180435200-180454400 Weak transcription Fetal Muscle Trunk muscle
44 chr1:180435200-180469000 Weak transcription Brain Angular Gyrus brain
45 chr1:180435400-180448000 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:180435400-180448200 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr1:180435600-180448600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr1:180435800-180444600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:180436200-180444400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:180436400-180440800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015