The 2.0 version of rSNPBase

Variant report

Variant rs10915702
Chromosome Location chr1:223930996-223930997
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223915400-223933000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:223915400-223933000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr1:223915400-223936200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:223915800-223931600 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:223916600-223932600 Weak transcription Fetal Brain Female brain
6 chr1:223919200-223935600 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr1:223919200-223936200 Strong transcription Primary monocytes fromperipheralblood blood
8 chr1:223919800-223931200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:223921200-223932800 Weak transcription Primary B cells from peripheral blood blood
10 chr1:223921200-223936000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:223921400-223931400 Weak transcription Rectal Smooth Muscle rectum
12 chr1:223921600-223932800 Weak transcription Liver Liver
13 chr1:223921600-223936600 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:223921800-223933400 Weak transcription Brain Angular Gyrus brain
15 chr1:223921800-223935600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:223921800-223936000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:223922200-223934600 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:223922200-223935600 Weak transcription Fetal Brain Male brain
19 chr1:223922800-223931600 Weak transcription Brain Germinal Matrix brain
20 chr1:223922800-223934800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr1:223923000-223931800 Weak transcription Brain Cingulate Gyrus brain
22 chr1:223925200-223934600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:223925400-223931800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:223925400-223931800 Weak transcription Ovary ovary
25 chr1:223925400-223934800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:223926800-223931400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:223926800-223931600 Weak transcription Hela-S3 cervix
28 chr1:223926800-223932800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:223927400-223933000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:223927600-223931600 Weak transcription Brain Hippocampus Middle brain
31 chr1:223927800-223931000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:223927800-223931600 Weak transcription Colon Smooth Muscle Colon
33 chr1:223927800-223935400 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr1:223928000-223931200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:223928000-223931200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:223928000-223931400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:223928000-223931400 Weak transcription Brain Anterior Caudate brain
38 chr1:223928000-223932800 Weak transcription Esophagus oesophagus
39 chr1:223928000-223933200 Weak transcription Psoas Muscle Psoas
40 chr1:223928000-223935400 Weak transcription Small Intestine intestine
41 chr1:223928000-223935600 Weak transcription Right Atrium heart
42 chr1:223928000-223936400 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr1:223928200-223933400 Weak transcription K562 blood
44 chr1:223928400-223936200 Weak transcription Primary hematopoietic stem cells blood
45 chr1:223928600-223931400 Weak transcription Brain Substantia Nigra brain
46 chr1:223928800-223931600 Weak transcription Duodenum Mucosa Duodenum
47 chr1:223928800-223932000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:223929000-223931800 Weak transcription Aorta Aorta
49 chr1:223929000-223934800 Weak transcription Fetal Kidney kidney
50 chr1:223929200-223931200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015