The 2.0 version of rSNPBase

Variant report

Variant rs10930566
Chromosome Location chr2:173491479-173491480
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173461400-173504200 Weak transcription NHEK skin
2 chr2:173462200-173507400 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr2:173465600-173495200 Weak transcription Ovary ovary
4 chr2:173471800-173495600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr2:173472600-173504600 Weak transcription Adipose Nuclei Adipose
6 chr2:173474600-173504400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:173478800-173496800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr2:173479600-173495800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:173479600-173496200 Weak transcription Thymus Thymus
10 chr2:173479800-173494600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr2:173479800-173496000 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:173480000-173492200 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr2:173480000-173493800 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr2:173480000-173494200 Weak transcription Primary T cells fromperipheralblood blood
15 chr2:173480000-173495000 Weak transcription Primary B cells from peripheral blood blood
16 chr2:173480000-173495200 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr2:173480000-173496000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr2:173480200-173495800 Weak transcription GM12878-XiMat blood
19 chr2:173480200-173499200 Weak transcription HepG2 liver
20 chr2:173485800-173497200 Weak transcription Brain Hippocampus Middle brain
21 chr2:173488800-173491800 Weak transcription Aorta Aorta
22 chr2:173488800-173494200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:173489200-173492800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr2:173489200-173496200 Weak transcription Fetal Thymus thymus
25 chr2:173489200-173507200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr2:173489400-173491800 Weak transcription Primary B cells from cord blood blood
27 chr2:173489400-173491800 Weak transcription Primary T cells from cord blood blood
28 chr2:173489400-173491800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:173489400-173492600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:173489400-173494400 Weak transcription Fetal Muscle Leg muscle
31 chr2:173489400-173500400 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr2:173489400-173504200 Weak transcription NHLF lung
33 chr2:173490000-173492000 Weak transcription Dnd41 blood
34 chr2:173490000-173493000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr2:173490200-173500600 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr2:173490400-173497200 Weak transcription HSMM muscle
37 chr2:173491200-173492200 Enhancers Fetal Stomach stomach
38 chr2:173491400-173494800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015