The 2.0 version of rSNPBase

Variant report

Variant rs6719140
Chromosome Location chr2:173494375-173494376
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173461400-173504200 Weak transcription NHEK skin
2 chr2:173462200-173507400 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr2:173465600-173495200 Weak transcription Ovary ovary
4 chr2:173471800-173495600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr2:173472600-173504600 Weak transcription Adipose Nuclei Adipose
6 chr2:173474600-173504400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:173478800-173496800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr2:173479600-173495800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:173479600-173496200 Weak transcription Thymus Thymus
10 chr2:173479800-173494600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr2:173479800-173496000 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:173480000-173495000 Weak transcription Primary B cells from peripheral blood blood
13 chr2:173480000-173495200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr2:173480000-173496000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr2:173480200-173495800 Weak transcription GM12878-XiMat blood
16 chr2:173480200-173499200 Weak transcription HepG2 liver
17 chr2:173485800-173497200 Weak transcription Brain Hippocampus Middle brain
18 chr2:173489200-173496200 Weak transcription Fetal Thymus thymus
19 chr2:173489200-173507200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr2:173489400-173494400 Weak transcription Fetal Muscle Leg muscle
21 chr2:173489400-173500400 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr2:173489400-173504200 Weak transcription NHLF lung
23 chr2:173490200-173500600 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr2:173490400-173497200 Weak transcription HSMM muscle
25 chr2:173491400-173494800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr2:173491800-173494600 Strong transcription Primary T cells from cord blood blood
27 chr2:173491800-173494800 Strong transcription Primary B cells from cord blood blood
28 chr2:173491800-173494800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:173492000-173494800 Strong transcription Dnd41 blood
30 chr2:173492200-173494800 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr2:173492800-173494600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr2:173492800-173494600 Strong transcription Fetal Stomach stomach
33 chr2:173492800-173497600 Weak transcription Fetal Brain Female brain
34 chr2:173493000-173494600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr2:173494000-173494600 Enhancers Fetal Brain Male brain
36 chr2:173494200-173494600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:173494200-173494600 ZNF genes & repeats Aorta Aorta
38 chr2:173494200-173494600 ZNF genes & repeats Esophagus oesophagus
39 chr2:173494200-173494600 ZNF genes & repeats Lung lung
40 chr2:173494200-173494600 ZNF genes & repeats Spleen Spleen

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Last update: Aug 31, 2015