Variant report

Variant	rs10936980
Chromosome Location	chr3:178573694-178573695
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs4552328	0.92[ASN][1000 genomes]
rs4621308	0.91[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6443590	0.91[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs6443591	0.91[ASN][1000 genomes]
rs6443592	0.91[ASN][1000 genomes]
rs6443593	0.91[ASN][1000 genomes]
rs6443594	0.91[ASN][1000 genomes]
rs6443596	0.91[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6783202	0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs7653581	0.92[ASN][1000 genomes]
rs9832653	0.86[ASN][1000 genomes]
rs9844876	0.91[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178567200-178575000	Weak transcription	Right Ventricle	heart
2	chr3:178568000-178578200	Weak transcription	HSMM	muscle
3	chr3:178568200-178577400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:178570400-178574600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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