Variant report

Variant	rs9844876
Chromosome Location	chr3:178573448-178573449
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10936980	0.91[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs35432713	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4380396	0.96[CEU][hapmap];0.83[CHB][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4381916	0.96[CEU][hapmap];0.83[CHB][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4552328	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4618207	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4621308	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6443589	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs6443590	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6443591	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6443592	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6443593	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6443594	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6443595	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6443596	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6783202	0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs7646561	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7653581	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9832653	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178567200-178575000	Weak transcription	Right Ventricle	heart
2	chr3:178568000-178578200	Weak transcription	HSMM	muscle
3	chr3:178568200-178577400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:178570400-178574600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr3:178573400-178573600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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