Variant report

Variant	rs6443593
Chromosome Location	chr3:178569999-178570000
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10936980	0.91[ASN][1000 genomes]
rs35432713	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4380396	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4381916	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4552328	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4618207	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4621308	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6443589	0.81[EUR][1000 genomes]
rs6443590	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6443591	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6443592	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6443594	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6443595	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6443596	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6783202	0.85[ASN][1000 genomes]
rs7646561	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7653581	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9832653	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9844876	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178566600-178570200	Enhancers	Fetal Lung	lung
2	chr3:178567200-178575000	Weak transcription	Right Ventricle	heart
3	chr3:178568000-178578200	Weak transcription	HSMM	muscle
4	chr3:178568200-178577400	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr3:178568600-178570400	Enhancers	Fetal Heart	heart
6	chr3:178569200-178572400	Weak transcription	HSMMtube	muscle
7	chr3:178569200-178572800	Weak transcription	Colon Smooth Muscle	Colon
8	chr3:178569800-178570400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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