Variant report

Variant	rs10947437
Chromosome Location	chr6:11595894-11595895
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10456423	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10947462	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12195523	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12198735	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12215876	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs295065	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58773927	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6911969	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73357895	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9469572	0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9469574	0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9469589	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11591400-11596600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:11593000-11598600	Weak transcription	A549	lung
3	chr6:11593200-11596000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:11593200-11597000	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr6:11593200-11600800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr6:11593200-11605400	Weak transcription	Right Atrium	heart
7	chr6:11593600-11604600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr6:11593800-11597600	Weak transcription	Ovary	ovary
9	chr6:11593800-11609800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr6:11594800-11598000	Weak transcription	Placenta	Placenta
11	chr6:11595200-11597000	Weak transcription	HSMM	muscle
12	chr6:11595200-11598600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr6:11595200-11602400	Weak transcription	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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