Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11000189	0.91[EUR][1000 genomes]
rs11000193	0.91[EUR][1000 genomes]
rs11000200	0.82[ASN][1000 genomes]
rs11000203	0.82[ASN][1000 genomes]
rs11000263	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11000355	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11000373	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11000375	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11000383	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11000395	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11527417	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12411770	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12414809	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16925327	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1903957	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1904043	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2199585	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2339899	0.82[ASN][1000 genomes]
rs2879635	0.81[ASN][1000 genomes]
rs60791951	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61847500	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7093940	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045692	chr10:53301450-54086823	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv519743	chr10:53721665-53773912	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv2750961	chr10:53726294-54010594	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:53713400-53742400	Weak transcription	Aorta	Aorta
2	chr10:53720800-53729000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr10:53720800-53732600	Weak transcription	Psoas Muscle	Psoas
4	chr10:53720800-53732800	Weak transcription	Fetal Muscle Leg	muscle

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