Variant report

Variant	rs11011248
Chromosome Location	chr10:37841309-37841310
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10827783	0.87[ASN][1000 genomes]
rs10827784	0.87[ASN][1000 genomes]
rs10827797	0.81[EUR][1000 genomes]
rs11011170	0.87[ASN][1000 genomes]
rs11011171	0.87[ASN][1000 genomes]
rs11011178	0.87[ASN][1000 genomes]
rs11011181	0.87[ASN][1000 genomes]
rs11011183	0.87[ASN][1000 genomes]
rs11011189	0.87[ASN][1000 genomes]
rs11011190	0.87[ASN][1000 genomes]
rs11011194	0.87[ASN][1000 genomes]
rs11011219	0.90[ASN][1000 genomes]
rs11011223	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[ASN][1000 genomes]
rs11011246	0.81[EUR][1000 genomes]
rs12355363	0.87[ASN][1000 genomes]
rs12357232	0.81[EUR][1000 genomes]
rs12357796	0.87[ASN][1000 genomes]
rs12764583	0.87[ASN][1000 genomes]
rs12778547	0.87[ASN][1000 genomes]
rs34893122	0.87[ASN][1000 genomes]
rs34930751	0.87[ASN][1000 genomes]
rs35007396	0.87[ASN][1000 genomes]
rs35196817	0.87[ASN][1000 genomes]
rs35620394	0.87[ASN][1000 genomes]
rs36036861	0.87[ASN][1000 genomes]
rs3739991	0.81[ASN][1000 genomes]
rs61857694	0.87[ASN][1000 genomes]
rs61857715	0.87[ASN][1000 genomes]
rs61857718	0.87[ASN][1000 genomes]
rs61857719	0.87[ASN][1000 genomes]
rs61857726	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895030	chr10:37715737-38674609	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1045684	chr10:37765361-38426204	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv540564	chr10:37765361-38426204	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	nsv8617	chr10:37815801-37877331	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1813461	chr10:37816684-37860065	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1041584	chr10:37834376-37894260	Enhancers ZNF genes & repeats Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv971878	chr10:37836844-37850135	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37837200-37842000	Weak transcription	Left Ventricle	heart
2	chr10:37837600-37842000	Weak transcription	Right Atrium	heart

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