Variant report

Variant	rs11020454
Chromosome Location	chr11:93361206-93361207
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:93356197..93359571-chr11:93360394..93364299,4	K562	blood:
2	chr11:93360947..93363200-chr11:93376219..93378928,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10765617	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10831062	0.88[EUR][1000 genomes]
rs10831063	0.90[EUR][1000 genomes]
rs10831064	0.91[EUR][1000 genomes]
rs10831076	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10831077	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10831079	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11020426	0.90[EUR][1000 genomes]
rs11020427	0.91[EUR][1000 genomes]
rs11020450	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11020452	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11020453	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11020455	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11606802	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12222957	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1939570	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1939571	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1939572	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1954783	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2155247	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34679231	0.90[EUR][1000 genomes]
rs4237559	0.86[EUR][1000 genomes]
rs4753089	0.88[EUR][1000 genomes]
rs4753093	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4753094	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4753480	0.87[EUR][1000 genomes]
rs67011570	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7119935	0.86[EUR][1000 genomes]
rs7120590	0.90[EUR][1000 genomes]
rs948017	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93356600-93364600	Weak transcription	Pancreas	Pancrea
2	chr11:93358800-93362800	Weak transcription	HepG2	liver

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