Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10765617	0.86[EUR][1000 genomes]
rs10831062	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10831063	0.92[EUR][1000 genomes]
rs10831064	0.92[EUR][1000 genomes]
rs10831076	0.85[EUR][1000 genomes]
rs10831077	0.85[EUR][1000 genomes]
rs10831079	0.86[EUR][1000 genomes]
rs11020426	0.91[EUR][1000 genomes]
rs11020427	0.92[EUR][1000 genomes]
rs11020450	0.87[EUR][1000 genomes]
rs11020452	0.86[EUR][1000 genomes]
rs11020453	0.86[EUR][1000 genomes]
rs11020454	0.86[EUR][1000 genomes]
rs11020455	0.85[EUR][1000 genomes]
rs11606802	0.88[EUR][1000 genomes]
rs12222957	0.88[EUR][1000 genomes]
rs12802772	0.95[ASN][1000 genomes]
rs1939561	0.95[ASN][1000 genomes]
rs1939570	0.86[EUR][1000 genomes]
rs1939571	0.86[EUR][1000 genomes]
rs1939572	0.86[EUR][1000 genomes]
rs1954783	0.92[CEU][hapmap];0.88[EUR][1000 genomes]
rs2155247	0.86[EUR][1000 genomes]
rs34679231	0.92[EUR][1000 genomes]
rs4121453	0.93[ASN][1000 genomes]
rs4237559	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4753089	0.94[EUR][1000 genomes]
rs4753093	0.89[EUR][1000 genomes]
rs4753094	0.86[EUR][1000 genomes]
rs4753480	0.95[EUR][1000 genomes]
rs67011570	0.85[EUR][1000 genomes]
rs7120590	0.93[EUR][1000 genomes]
rs948017	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv1039623	chr11:93141461-93328739	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93309800-93311200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr11:93310000-93311200	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr11:93310000-93311200	Enhancers	Hela-S3	cervix
4	chr11:93310200-93311000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr11:93310200-93311200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr11:93310400-93311000	Enhancers	Psoas Muscle	Psoas
7	chr11:93310400-93311000	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:93310400-93311200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr11:93310400-93311200	Enhancers	HSMM	muscle
10	chr11:93310400-93311200	Enhancers	NH-A	brain
11	chr11:93310400-93311200	Enhancers	NHDF-Ad	bronchial
12	chr11:93310400-93311200	Enhancers	Osteobl	bone
13	chr11:93310400-93311600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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