Variant report

Variant	rs11029441
Chromosome Location	chr11:26279145-26279146
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10834930	0.92[ASN][1000 genomes]
rs10834931	0.92[ASN][1000 genomes]
rs11029413	0.82[ASN][1000 genomes]
rs11029415	0.83[ASN][1000 genomes]
rs11029416	0.83[ASN][1000 genomes]
rs11029417	0.94[ASN][1000 genomes]
rs11029418	0.94[ASN][1000 genomes]
rs11029419	0.94[ASN][1000 genomes]
rs11029420	0.92[ASN][1000 genomes]
rs11029424	0.96[ASN][1000 genomes]
rs11029427	0.98[ASN][1000 genomes]
rs11029428	0.98[ASN][1000 genomes]
rs11029430	0.98[ASN][1000 genomes]
rs11029432	0.98[ASN][1000 genomes]
rs11029433	0.98[ASN][1000 genomes]
rs11029435	0.96[ASN][1000 genomes]
rs11029436	0.98[ASN][1000 genomes]
rs11029437	0.98[ASN][1000 genomes]
rs11029438	0.98[ASN][1000 genomes]
rs11029439	1.00[ASN][1000 genomes]
rs11029442	1.00[ASN][1000 genomes]
rs11029443	1.00[ASN][1000 genomes]
rs11029444	1.00[ASN][1000 genomes]
rs11029445	1.00[ASN][1000 genomes]
rs11029447	0.81[ASN][1000 genomes]
rs11029448	0.81[ASN][1000 genomes]
rs12049868	0.92[ASN][1000 genomes]
rs12222020	0.98[ASN][1000 genomes]
rs12222176	0.96[ASN][1000 genomes]
rs12222558	0.96[ASN][1000 genomes]
rs12222677	0.94[ASN][1000 genomes]
rs12223415	0.94[ASN][1000 genomes]
rs12223862	0.96[ASN][1000 genomes]
rs12224620	0.94[ASN][1000 genomes]
rs12224848	0.96[ASN][1000 genomes]
rs12225290	0.96[ASN][1000 genomes]
rs12225305	0.96[ASN][1000 genomes]
rs12225764	0.98[ASN][1000 genomes]
rs1381187	0.99[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1461398	0.80[AFR][1000 genomes]
rs1461399	0.82[AFR][1000 genomes]
rs1903457	0.81[AFR][1000 genomes]
rs55665111	0.81[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs59898647	0.96[ASN][1000 genomes]
rs60724653	0.94[ASN][1000 genomes]
rs60835780	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832094	chr11:26130733-26292782	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26275800-26290600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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